Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8862 |
Symbol | |
ID | 8340255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10274993 |
End bp | 10275748 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961952 |
Product | endonuclease III |
Protein accession | YP_003119516 |
Protein GI | 256397952 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAG CCGCTGCCGA TGTTTCCGAC ACCCGGGTGG CGAAGCCGGA GACGCACACG GCGCTGGTCA GGCGCGCCCG CAAGATCTAC CGGGAACTCA GCGGCGTCTA TCCGTACGCC AAGTGCGAGC TCGACTTCGA GAACCCCTAC CAGCTGCTGA CCGCGGTCAT CCTGTCCGCC CAGTCGACTG ACGTGGGCGT GAACAAGGTC ACGCCGGCGT TGTTCCAGCG CTACCCGACG CCCGCCGATC TGGCCGCGGC CGATCCGGAG GAGCTCGAGG CGCTGATCAA ACCCACGGGC TTCTTCCACA ACAAGGCCAA GTCGCTGTTG GGCATGTCGA AGTCCGTGGT GTCCGACTTC GGCGGGCAGG TGCCGGGCCG GCTCAACGAT CTGGTGAAGC TCCCCGGCGT CGGGCGCAAG ACCGCCAACG TCGTGCTCGG TGACGCGTTC GGCGTTCCCG GCATCACCGT CGACACCCAC TTCGGGCGCC TGGTGCGCCG CTTCGGGTGG ACCGGGCTGG AGGACCCGGT CAAGGTCGAG CACGCGATCG GCGAGATGTT CCCGCGCAAG GACTGGACGC TGCTCTCGCA CCGGCTCATC TATCACGGTC GGCGGGTCTG CCACGCCAAG AGGCCGGCGT GTGGCGCGTG CCCGATCGCG AAGCTGTGTC CCAGCCGGGG GATCGGGGAG CAGGATCCGG TGAAGGCGGC GGCGCTGCTC AAGTACAAGC CGGGGGAAGG CGGTCTGCCG CTGTGA
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Protein sequence | MTRAAADVSD TRVAKPETHT ALVRRARKIY RELSGVYPYA KCELDFENPY QLLTAVILSA QSTDVGVNKV TPALFQRYPT PADLAAADPE ELEALIKPTG FFHNKAKSLL GMSKSVVSDF GGQVPGRLND LVKLPGVGRK TANVVLGDAF GVPGITVDTH FGRLVRRFGW TGLEDPVKVE HAIGEMFPRK DWTLLSHRLI YHGRRVCHAK RPACGACPIA KLCPSRGIGE QDPVKAAALL KYKPGEGGLP L
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