Gene Caci_8862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8862 
Symbol 
ID8340255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10274993 
End bp10275748 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID644961952 
Productendonuclease III 
Protein accessionYP_003119516 
Protein GI256397952 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAG CCGCTGCCGA TGTTTCCGAC ACCCGGGTGG CGAAGCCGGA GACGCACACG 
GCGCTGGTCA GGCGCGCCCG CAAGATCTAC CGGGAACTCA GCGGCGTCTA TCCGTACGCC
AAGTGCGAGC TCGACTTCGA GAACCCCTAC CAGCTGCTGA CCGCGGTCAT CCTGTCCGCC
CAGTCGACTG ACGTGGGCGT GAACAAGGTC ACGCCGGCGT TGTTCCAGCG CTACCCGACG
CCCGCCGATC TGGCCGCGGC CGATCCGGAG GAGCTCGAGG CGCTGATCAA ACCCACGGGC
TTCTTCCACA ACAAGGCCAA GTCGCTGTTG GGCATGTCGA AGTCCGTGGT GTCCGACTTC
GGCGGGCAGG TGCCGGGCCG GCTCAACGAT CTGGTGAAGC TCCCCGGCGT CGGGCGCAAG
ACCGCCAACG TCGTGCTCGG TGACGCGTTC GGCGTTCCCG GCATCACCGT CGACACCCAC
TTCGGGCGCC TGGTGCGCCG CTTCGGGTGG ACCGGGCTGG AGGACCCGGT CAAGGTCGAG
CACGCGATCG GCGAGATGTT CCCGCGCAAG GACTGGACGC TGCTCTCGCA CCGGCTCATC
TATCACGGTC GGCGGGTCTG CCACGCCAAG AGGCCGGCGT GTGGCGCGTG CCCGATCGCG
AAGCTGTGTC CCAGCCGGGG GATCGGGGAG CAGGATCCGG TGAAGGCGGC GGCGCTGCTC
AAGTACAAGC CGGGGGAAGG CGGTCTGCCG CTGTGA
 
Protein sequence
MTRAAADVSD TRVAKPETHT ALVRRARKIY RELSGVYPYA KCELDFENPY QLLTAVILSA 
QSTDVGVNKV TPALFQRYPT PADLAAADPE ELEALIKPTG FFHNKAKSLL GMSKSVVSDF
GGQVPGRLND LVKLPGVGRK TANVVLGDAF GVPGITVDTH FGRLVRRFGW TGLEDPVKVE
HAIGEMFPRK DWTLLSHRLI YHGRRVCHAK RPACGACPIA KLCPSRGIGE QDPVKAAALL
KYKPGEGGLP L