Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8860 |
Symbol | |
ID | 8340253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10273095 |
End bp | 10274276 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961950 |
Product | Colicin V production protein |
Protein accession | YP_003119514 |
Protein GI | 256397950 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCC TCGACATCCT GCTGCTGCTG GTCGTGGCGG CGTTCGCGGT CTCTGGGTAC CGGCAGGGCT TCGTCGTGGG CGTGGTCTCC TTCGCCGGCT TCCTCGGCGG TCTGGCGCTG GGCTTCGTGA TCGTCCCGAC GTTCCTGGAC CGGTCCTCGG CGAGCCTGCT GGCCTCGGTG ATAGCGCTGT GCGCGGTGCT GGCGCTGGCG GTGGTCGGGC AGGTGCTCGG CTCGATGCTG GGCGCCAAGC TGCGCGAGGC CATCACCTGG CAGCCGGCGC AGATGGTGGA CGCGGTCAGC GGTGCGGTGG TGTCGGTGAT CGCGGTGCTG ATGGTCGCGT GGTTCCTGGG GCTGGCGCTG TTCACGTCCT CGGTGCCGAC CATCAGCGAC CAGGTGCGCT CCTCCAGCAT CCTCAAGGGC ATGACCCAGG TGCTGCCGCA GGGCGCCAAC CAGTGGTTCA GCTCGTTCTC CAACGTCCTG AACCGCAACG GCTTCCCGCA GGTGTTCGCG CCCTTCCAGG CCGAGGACCC GGCGAACGTG CCGCCGCCGG ACCCGGCGCT GCTGAACAGC CCGGTGATCG CCGCCGACCG GGCCTCGATC GTGAAGATCC GCGGCCAGGC GCCCTCGTGC GGCAAGGACA TCGAGGGCTC CGGATTCGTC TACGCCTCCG GCAAGGTGAT GACCAACGCG CACGTGGTCG GCGGTACGCG CTCGCTGGTC GTGCGCCAGT CCAACGGCAA GCAGTACGCG GCCACCGTGG TGCTGTTCGA CCCCAAGCGG GACATCGCCG TCCTGGACGT CCCCAGCCTG AAGGCGCCGC AGCTGAACTT CGACCTCGGC GGCAAGGCCA ACGACTCCTC GCTGGTGGTC GGCTACCCCG AGGACGGCCC GTTCACCGTC GACGCCGCGC GCATCCGCGA GCAGATCACG GCGACCGGCG CCGACATCTA CTCCAACGGC AACGTCCGCC GGCAGGTGTT CGCCCTCTAC GCGCAGGTGC AGCAGGGCAA CTCCGGCGGC CCGCTGCTGT CCACGGACGG CCGGGTGCTC GGCGTGGTCT TCGCCAAGTC GCTGGAGGAC AAGAACACCG GCTACGCGCT GACCGCGCAG GAGGTCTCCT CCGACGCGCA GGCCGGCGCC GCGACCGACG TCCCGGTCAA CACCCAGGCC TGCGCGATCT GA
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Protein sequence | MDILDILLLL VVAAFAVSGY RQGFVVGVVS FAGFLGGLAL GFVIVPTFLD RSSASLLASV IALCAVLALA VVGQVLGSML GAKLREAITW QPAQMVDAVS GAVVSVIAVL MVAWFLGLAL FTSSVPTISD QVRSSSILKG MTQVLPQGAN QWFSSFSNVL NRNGFPQVFA PFQAEDPANV PPPDPALLNS PVIAADRASI VKIRGQAPSC GKDIEGSGFV YASGKVMTNA HVVGGTRSLV VRQSNGKQYA ATVVLFDPKR DIAVLDVPSL KAPQLNFDLG GKANDSSLVV GYPEDGPFTV DAARIREQIT ATGADIYSNG NVRRQVFALY AQVQQGNSGG PLLSTDGRVL GVVFAKSLED KNTGYALTAQ EVSSDAQAGA ATDVPVNTQA CAI
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