Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8853 |
Symbol | |
ID | 8340246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10265527 |
End bp | 10266321 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961943 |
Product | ABC transporter related |
Protein accession | YP_003119507 |
Protein GI | 256397943 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0889132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGG TCAAGGCCGC CGGGGTGCGG GTGGTGCTGG ACCACAAGCC GATCCTGCAC GGCGTCGACC TCGCCGTGGG CTCCGGTTCC TGGCACGCGG TGCTCGGTCC GAACGGCGCG GGCAAGTCCA CGCTGCTCAA GGCGATCGTC GGAATCCTTG CCTACCAAGG GGAAATCCGC GTCGGCGGCG AATCGGTCGC GAAGCTGCCC GCCAAACACC GCGCGCGCCT CATCGCCTAC GTGCCGCAGC AGCCGCAGCT CCCCGGCGAC ATGACCGTCG CCGAATACGT CCTGCTCGGC CGTACTCCGC ACCTGGGCTA CCTCGGCGTC GAGTCCCGGT CCGACCGGGC CATCGCCGAG AGTGCGCTGG AGCGCCTCGA CCTCGCCGGA TTCGCCCACC GGAGGCTCGG CACGATGTCC GGCGGCGAAC GCCAGCGCGT CGTCCTGGCC CGCGCCCTCG CGCAGCAAGC CGGCGTCCTG CTCCTCGACG AGCCGACCAC CGCCCTCGAC CTCGGCCACC AGCAACAGGT CCTGGACCTG GTCGACGAAC TGCGCGCGAC CGAGGGCCTG ACCGTGATCA GCACTCTGCA CGACCTCAGC CTCGCCGCGC AGTACGCCGA CGAGCTCACC CTCCTCGTCG GCGGCGCCGT CGTCGCCACC GGCACGGCGC GCGAAGTGCT GACGGAGCAA CGGATTTCCG AGCACTACGG AGCCCGGGTC AAAGTTCTCG ATGACGGCGA AGGGCGACCG GTCATCCACC TTGTCCGCAG GACACACCAG CGCCAAGGCG AATAA
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Protein sequence | MSAVKAAGVR VVLDHKPILH GVDLAVGSGS WHAVLGPNGA GKSTLLKAIV GILAYQGEIR VGGESVAKLP AKHRARLIAY VPQQPQLPGD MTVAEYVLLG RTPHLGYLGV ESRSDRAIAE SALERLDLAG FAHRRLGTMS GGERQRVVLA RALAQQAGVL LLDEPTTALD LGHQQQVLDL VDELRATEGL TVISTLHDLS LAAQYADELT LLVGGAVVAT GTAREVLTEQ RISEHYGARV KVLDDGEGRP VIHLVRRTHQ RQGE
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