Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8840 |
Symbol | |
ID | 8340233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10247228 |
End bp | 10247701 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961930 |
Product | GtrA family protein |
Protein accession | YP_003119494 |
Protein GI | 256397930 |
COG category | [S] Function unknown |
COG ID | [COG2246] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGGC TCATCAGGAC CCTGGCGAGG AACACCTTCG TCCGCTACGC CTTCAGCGGC GGTTCGGCGC TGGTCACCGA GGAAGTCGTG CTGTTCCTGA CGCACGGCTT GCTGAAGTTC CCGCTGTGGC TGGCCACGGG TCTGGCGTAC CTCATCGCGT TCGGCGTCAA CTTCTCCATC AACCGGATGC TGACCTTCGC CGACCACGGC GCGCGCGAGG GCGCGGTGCA CAAGCAGACC GTGCGCTTCG CACTGCTGGT CTCCGTGAAC CTGGGCGTCA CGCAGGTGCT GATGTACTCG CTGACCGGCG CGGGCGTGAA CTACCTGATC GCCAAGCCGC TGTCGACGGT GGTCATCACG CTCTACAACT TCTGGCTGTA CAAGCACTGG GTGTTCAAGC CGGAGACGAC GGCGGCGGCC GGCGCCCCAG GCGCCCCTCA GCCCAGTGCG CCGGCCTCCG AAGTCAGCGC TTGA
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Protein sequence | MTGLIRTLAR NTFVRYAFSG GSALVTEEVV LFLTHGLLKF PLWLATGLAY LIAFGVNFSI NRMLTFADHG AREGAVHKQT VRFALLVSVN LGVTQVLMYS LTGAGVNYLI AKPLSTVVIT LYNFWLYKHW VFKPETTAAA GAPGAPQPSA PASEVSA
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