Gene Caci_8817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8817 
Symbol 
ID8340210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10220560 
End bp10222116 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content71% 
IMG OID644961907 
Productband 7 protein 
Protein accessionYP_003119471 
Protein GI256397907 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.209913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.652207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGTG CCGTTCCGTA CGTCGCAGGG GGAGCCGTAC TCCTCATCGC AATGCTCGTA 
TTCCTGTTCA AGGCCATGTG GCGGGTCGCC GAGCCGAACC AGGCGCTGAT CGTCTCCGGG
CGTCGGCACC GCGGCGCGGG CAATGACGGG CTGGGCTTCC GCATCGTCAC CGGGGGCGGC
AGCTTCGTGC TGCCGGGTGT GCAGGTGGTG CGGCGGCTGT CGCTGGATCT CAACGAGTCC
GGGCTCGAGG TCGAGTGTGT GACCCGGCAG GGGATCCCGT TGCACGTCAA GGGTGTGGTG
ATCTTCAAGG TCGGCGACGA CCACGCCTCG ATCGCCAACG CCGCGCGCCG GTTCCTGGAC
CAGCAGGCCC AGATGGGGGT CCGGGTCCAC AACATCTTCG CCGGGCACCT GCGCTCCATC
GTCGGCGGTC TGACCGTCGA GGAGATGATC CGCGAGCGCG AGCGGCTCAC CGAGCAGACC
CGCGCCACCA GCGGCACCGA GATGGAGAAG CTCGGCCTGA TCATCGACTC GCTGCAGATC
CAGGAGATCG ACGACCCGAC CGGGTACATC AAGGCCCTGT CGGCGCCGCA CGCCGCCGCC
GTCACCCGGG ACGCCCGCAT CGCGCAGGCC GCCGCCGACC AGAGCGCCAC CGAGGCCGAG
GCGGAGGCCA ACGCCCGCAA GGCCGAGGCG ATGCGCAAGG CGAGCATCCA GCAGGCCGGC
TACCAGGCCG AGGTGGAGGA GGCGCAGGCC CGTGCGCGCC AGGCCGGACC GCTGGCCGAC
GCGCAGGCGC GGCAGGACGT CGTCGTCCAG GAGACGCGCG TGGCCGAACT CGAGGCGCAG
CGCAAGGAAC AGCAGCTGCA GGTCGAGGTT CGCAAGCCGG CCGACGCCCG CGCGTACGAG
ACCGTCACGG TCGCGCAGGC CGACCGCGAG GCGAAGATCC ACGAGGCCGA GGCGCACGCC
CGGGAGACCG AACTGCGAGC CGTCGCCGAA GCCGGCCGGG TCAAGGCGGC AGCCGAAGCC
GAGGCGCAGG CGAAGCGTTC GCTGGGTCAG GCGTCCGCCG ACGCGGCGCA AGCCCAGGCT
CTCGCCGACG CAGAAGGGCG CCGCGCCCGC GGTCTGGCCG AGGCGGACGC GCGCCGGGCC
GAGGGCATCG CGGAGGCTGA GACCCGCAAG GCCCGCGGTC TGGCCGAGGC CGACGCCACA
CAGGCGCTGG GTCTGGCCGA GGCCGAGGCG ATCAAGGCCC GCGGTGAGGC GCTGGCCGAG
CACCAGGAAG CGATCATCAC CCAACAGCTG GTCTCGCAGC TGCCGATGGT GGTCGCGGCC
GGCGCCAAGT CCTTCGAGAA CGTCGAGCAC ATGGTGCTGC TCAACGGCGC CGAGGGCGTG
ACGGACGTGT TCAGCAAAGC CCTGACGATG GGTGGCACCG GCCTGGGTCT GGCGCGCCAG
ATGCTTGCTT CGATGGGGGA CCAGGCGTTG CGCCGCGCCA CCCTGCCGGA GCAGAACGGC
AAGGCCGTGG GTCTGGAGAC GAAGGAGACC GTGCAGGTCG TGGAGGTCGT CGAGTAG
 
Protein sequence
MSSAVPYVAG GAVLLIAMLV FLFKAMWRVA EPNQALIVSG RRHRGAGNDG LGFRIVTGGG 
SFVLPGVQVV RRLSLDLNES GLEVECVTRQ GIPLHVKGVV IFKVGDDHAS IANAARRFLD
QQAQMGVRVH NIFAGHLRSI VGGLTVEEMI RERERLTEQT RATSGTEMEK LGLIIDSLQI
QEIDDPTGYI KALSAPHAAA VTRDARIAQA AADQSATEAE AEANARKAEA MRKASIQQAG
YQAEVEEAQA RARQAGPLAD AQARQDVVVQ ETRVAELEAQ RKEQQLQVEV RKPADARAYE
TVTVAQADRE AKIHEAEAHA RETELRAVAE AGRVKAAAEA EAQAKRSLGQ ASADAAQAQA
LADAEGRRAR GLAEADARRA EGIAEAETRK ARGLAEADAT QALGLAEAEA IKARGEALAE
HQEAIITQQL VSQLPMVVAA GAKSFENVEH MVLLNGAEGV TDVFSKALTM GGTGLGLARQ
MLASMGDQAL RRATLPEQNG KAVGLETKET VQVVEVVE