Gene Caci_8804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8804 
Symbol 
ID8340197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10209015 
End bp10209914 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content69% 
IMG OID644961894 
Productbeta-lactamase domain protein 
Protein accessionYP_003119458 
Protein GI256397894 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA TCAAGATTGG CGACGTGACC GTCGCCAGGG TCGAAGAGAT GCACGGACCC 
GTCGGCATGA CCCCGGAGCA GTTCTTCCCG GGCTGGACCG GCGAGGCCTG GCAGGACAAC
CGCGATTGGC TCGTGCCGCA CCACCTCGGG GACGAGGACG GGCAGGTGCG GGTGGCGTTC
CAGACCTACG TGCTGCGCAG CGAGGGCCGC ACGATCCTGG TGGACACCGG CGTCGGCAAC
GACAAGACCC GGCCGGCGGT CGGCGCCTGG GACCACCTGT CCCTGGGCTA CCTGGAGAAC
CTGGCGGCGG CCGGCGTCCG CCCCGAGGAC GTGGACCTGG TCGTGAACAC CCACCTGCAC
GTCGACCACA TCGGCTGGAA CACCCGGCTG GTCGACGGGC AATGGGTCCC GACGTTCCCG
AACGCCACCT ACCTGATGCC GAGGGTGGAC TTCGAGCACT TCGACCCGGC GAAGAACCCG
GGAATCGCCG GCAGCGTCAA CGAGAACGCC TTCGAGGACA GCATCGAGCC GGTCCGGGCG
GCGGGGCGGA TTCAGCTCTG GGAAGACGAA CATCGGGTGG ACGGCGCCTT GCGGCTGCTC
GCCGCTCCGG GGCACACACC GGGTGCCAGC GTCCTGATTC TCAGCTCCGG CGAGGACAAG
GCGCTGTTCG CCGGAGACCT GCTGCACACC CCGCTCCAGG TCGCCCATAC CGAGTTCGAC
AGCTGCTTCT GCGAGGACCC GGCGACCGCG CAGGCGACCC GGCGTGACCT GCTTGGCTGG
GCCGCGGACA ACACCGCTCT GGTGCTGCCC GCGCACTTCA CCGGGCAGAC CGCCTTGGAG
GTCGCGCGTG ACGGCGACCG CTTCGCGATC AAGAACTGGG GCCCTTTCCC CGCCTACTGA
 
Protein sequence
MNEIKIGDVT VARVEEMHGP VGMTPEQFFP GWTGEAWQDN RDWLVPHHLG DEDGQVRVAF 
QTYVLRSEGR TILVDTGVGN DKTRPAVGAW DHLSLGYLEN LAAAGVRPED VDLVVNTHLH
VDHIGWNTRL VDGQWVPTFP NATYLMPRVD FEHFDPAKNP GIAGSVNENA FEDSIEPVRA
AGRIQLWEDE HRVDGALRLL AAPGHTPGAS VLILSSGEDK ALFAGDLLHT PLQVAHTEFD
SCFCEDPATA QATRRDLLGW AADNTALVLP AHFTGQTALE VARDGDRFAI KNWGPFPAY