| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8771 |
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| Symbol | |
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| ID | 8340163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10171234 |
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| End bp | 10172877 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961862 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003119427 |
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| Protein GI | 256397863 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.359858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAGA AGCGCAAGCC GGGCTTGATC GCCGGCCGGG TCATGGCCGC GACGCTGAGC
GTGGTCGTGG TCCTGGCCAC CGGCGCCGTC TGGTTCGGGA ACAAGCAGCT CACCAGCGGC
GGGCACACCA CGGACTCGAT CAACCAGATC AAGCCCGGCC AGCAGGGCTA CGTCGCCCCG
CACCTCGGCA ACGACGTCAA CCTGCTGCTG ATCGGGCTGG ACTCGCGCAA GGACATGAAC
GGCAACGATT TGCCGACGTC TCTGGTCGAG GGCGAGCTGC ACGCCGGCTC CTCGGCCATC
GGCTACTACA ACACCAATGT CCTGATCCTC ATGCACATCC CGGCCAACGG CGGCACGGTC
ACCGCGTACT CGATACCGCG CGACAGCGAC GTCGAGCGCC CCGGCGGCCC GGCGGCCATC
CCCGGCCTCG GTACGGTCCA GGTCCCGGAC ATGGGCAAGG GCAAGATCAA GGAGGCTTAC
GGCGACGCCA AGAACTTCGC CGACACCAAG CTCGCCGCCA CCGGGTTGAA GGACAAGGCG
AAGGAAGAGG CCGAGAGCCG CGAAGTCGGC CGCGAGGCGA CCATCCGGGC CGTGCAGAAC
CTCACCGGCG TCCACGTCGA CCACCTCGCC GAGGTCAACC TGCTCGGGTT CTACGACACC
GTGAACGCGA TCGGGAACAT CCAGGTCTGC CTCAAGGCGC CGGCGTACGA CCCGATCGAG
GACGGCGCGG GCACCGGCCT CAACCTGCCC GCCGGCGTCT CGACCATCGA CGCGGCGACC
GCCCTGCAGT TCGTGCGCCA GCGCTTCCAC CTGCCCAACG GCGACCTGGA CCGCACGCAC
CGCCAGCAGG CGTTCCTGGC TTCGGTGACG CAGAAGCTGA AGCAGGAAGG CATCCTGAAC
GACATCGGCT CCATGCAGAA GCTCCTCGAC GTGGTGAAGA ACGATGTCGT CATCGACGAC
GGCTGGAGCG TGCTGGACTT CGCCTCCCAG GCCTCGAACC TGACCGGCGG CAACGCCGAG
TTCATCACGC TGCCGACCAC CGGGACCGTC ATGATCGGTA CGGAGAGCGC GCTGACCGTC
GACCCGGTGG CGATCAAGAA GACGGTCACC ACCGCGTTCA CCAATGACGC CGCGGTCGCT
CCGCCGCCGA CCACCGCCTC GACCGCCGGC TCCACTCCGC CCCCGGCACC TCCGTCGACG
ACACCGACGC CGCAGGCGAA CATCTCCATC GAGAACGGCA CCAAGACCAC GGGTCTGGCG
CTGAAGGTCT CCGGCGCGCT GTTCGACGCC GGCATCCCGG TCAGCAAGAC CGGGAACGGC
GGCAACAACG TCCAGCACAC GACCATCCGC TACGGCGCCG GCGAGGAAGC CCTGGCCAAG
CAACTCCAGG CCAAGCTCGG GACCAAGACC GCTCCGACCG CGAGCAGCTC GGTCCCCAAG
GGCAGCATCG TGGTGACCAT CGGCTACGAC TACAAGCTGC CGCCGGCTAA GACCAGCACC
AGCACCAGCA CGCCGAAGCC GGGCCAGCCG ACCTCCACGT CGACCAGCAC GTCCAGCGAC
AACTCCGCCG ACTCCTCCGG GCTGAGCTCC GGCGCGGCGG TCGACATGTC GGGGTCGAAG
AACGGCATCC CCTGCGTGTA CTGA
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| Protein sequence | MSEKRKPGLI AGRVMAATLS VVVVLATGAV WFGNKQLTSG GHTTDSINQI KPGQQGYVAP
HLGNDVNLLL IGLDSRKDMN GNDLPTSLVE GELHAGSSAI GYYNTNVLIL MHIPANGGTV
TAYSIPRDSD VERPGGPAAI PGLGTVQVPD MGKGKIKEAY GDAKNFADTK LAATGLKDKA
KEEAESREVG REATIRAVQN LTGVHVDHLA EVNLLGFYDT VNAIGNIQVC LKAPAYDPIE
DGAGTGLNLP AGVSTIDAAT ALQFVRQRFH LPNGDLDRTH RQQAFLASVT QKLKQEGILN
DIGSMQKLLD VVKNDVVIDD GWSVLDFASQ ASNLTGGNAE FITLPTTGTV MIGTESALTV
DPVAIKKTVT TAFTNDAAVA PPPTTASTAG STPPPAPPST TPTPQANISI ENGTKTTGLA
LKVSGALFDA GIPVSKTGNG GNNVQHTTIR YGAGEEALAK QLQAKLGTKT APTASSSVPK
GSIVVTIGYD YKLPPAKTST STSTPKPGQP TSTSTSTSSD NSADSSGLSS GAAVDMSGSK
NGIPCVY
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