| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8593 |
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| Symbol | |
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| ID | 8339975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9963989 |
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| End bp | 9965059 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961678 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003119253 |
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| Protein GI | 256397689 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.902374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.799796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAATC GATTCCTTCG GTCTGGCGCG GCCGGCGCGG CCCTACTCAC CAGTGTGCTC
GGGCTGCCGT ACGTCCTGCT CGCTTATATC GGGAGCCCGC TTCCGGCCAA GGCGCCTTCT
CCGGCGCGGA TGGCCTGGTG GCTGAAGAGC GGGCAGTTCG ATGATCGTGC TGCCGTCGTT
GTGCTTGCCT ATGTGCTTTG GGCCTGCTGG GCGATCTTCA TCGTCCAGGT TGCGGCGCAG
CTCCCGGGTG CGGTTCGTGC TGCCGTCCGG GTGCGGCACG GCGGGCAGCC GCAGACTGGC
CGAACTCGAA GCCTCGTCGG TGGCGGCGTG GTTCAGGTCC TTCTCACCGC GCTGCTGGTG
ACGCTCTTTG TCCCCCGTAG CGCCGTGGCT GCGACATCCG TCGGGCTGGT CGGCGCCTCG
GGCTCGATGG ATGCTCGTCC GGCGGCCGTA GGCTTGCCGG TGCCTGGCGC CGAGTCCAGC
AAAGCTGGAG AGCAGACGGT TCGGGTTCAT GTCGTCGAGC GCGGCGACAA TCTGTGGGAC
ATCGCAGCTA CCTACCTCGG CGACCCGAAC CGCTGGCCAG AGATCTATGA GAAGAACGTC
GGCATCCCGC AGCCTGACGG TCTGGTGCTG ACGAATCCCG ACGTCGTTCA GCCCGGCTGG
ACGCTCACGA TGCCCGTGGC AGCCGACGCG GCCAAGCAGG GACCTGCGTA TGTGCCCAGC
CAGGTACCGC AAGCCAGTGA TGTCGTCCCG AACAACGACG AGCATTCTTC AACCGCACCG
ACCACGAGTC CAAACGAGCC AAACCGATCG GCTGAGGCTC GGCAGTCGGC GGCGTTCGCG
GAAGCGGGGC GGGTGCAGGC CGCGCCTCGG GATCGCGTCG CGATCAGCTT GGGAGCCGAC
GGGTACGTGG GTATCGGACT CGCGGCCGGC ATCGCGGCGG CTCTGACTGC GGGTCGTCTG
CGTCGGCGGG CTCGCGCTCG TGCTCAGTTC CCGATCCCGC TTGATGGTGT TCCTGCTGAC
GGTGGGGTGG GGCGGACGTG CTCGCGGAGC TGGAACGTGC GCATCTGCTG A
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| Protein sequence | MTNRFLRSGA AGAALLTSVL GLPYVLLAYI GSPLPAKAPS PARMAWWLKS GQFDDRAAVV
VLAYVLWACW AIFIVQVAAQ LPGAVRAAVR VRHGGQPQTG RTRSLVGGGV VQVLLTALLV
TLFVPRSAVA ATSVGLVGAS GSMDARPAAV GLPVPGAESS KAGEQTVRVH VVERGDNLWD
IAATYLGDPN RWPEIYEKNV GIPQPDGLVL TNPDVVQPGW TLTMPVAADA AKQGPAYVPS
QVPQASDVVP NNDEHSSTAP TTSPNEPNRS AEARQSAAFA EAGRVQAAPR DRVAISLGAD
GYVGIGLAAG IAAALTAGRL RRRARARAQF PIPLDGVPAD GGVGRTCSRS WNVRIC
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