Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8563 |
Symbol | |
ID | 8339944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9934057 |
End bp | 9934815 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961647 |
Product | hypothetical protein |
Protein accession | YP_003119223 |
Protein GI | 256397659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.33321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.010554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCC GGCCCGAGCT CGAGGACCGC GCCAAGCGGT ATCTCGTGCC GGGCGAGCGG CTCGTCATAG CCGTGCGGCA CCATCTGGCC GCGGTCATCA TCCCGGTGCT GATCGCGGTC GCGGCCGTGG TCCTCGCGAT GGGGATCGAC ATCTTCTCCT CGCCCGACGC CGGCCAGTTC CGGCTGGGCG CGTGGGCGGT GGCCGGGGTG GCCTTCCTCT ATATGGCATG GAACGTCGCG GTGTGGAACC AGGATCTGCT GATAGTGACC AACAAGCGGA TCCTGCACAC CCACGGCGTG ATCACCCGGT CCTTCGACGC GCTGCCCTTG GGCAAGGTCA ACGACATGCG CGTCGAACGG GACCTGCTCG GCCGGATCCT GGGCTACGGC AGATTCAACG CCAAGGCCGT CGGCGACGCC CCGCTGGGCC GGCGCGGCCT GGACTTCATC TCGCACGTCG AGGAGACCTG GCTGGAGATC AGCAACCTGT TGTACGGTCC GGGCGCCAAG TCCGGTCCCA AGGATCCGCA AGAGGTACGT ATCGTCGGTG CGGTCCTTCC GGACATGCAC GGCGAACCGG TGGAGATCGT CATGCCGCCG GTGTCCGTGA AGAGTCCAGC CGATGACGAC AAGGCACACC CGGTGAACGC GGCCATGCTG CCGGTGAAGG TGTTCCGCGA CGACAAGGGC GAACGGGCGT TTGAGACCGA CGTCACAACG CCGGGCAACA AACGTCGCAG GATTCGCTTT TTCCGCTAA
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Protein sequence | MLLRPELEDR AKRYLVPGER LVIAVRHHLA AVIIPVLIAV AAVVLAMGID IFSSPDAGQF RLGAWAVAGV AFLYMAWNVA VWNQDLLIVT NKRILHTHGV ITRSFDALPL GKVNDMRVER DLLGRILGYG RFNAKAVGDA PLGRRGLDFI SHVEETWLEI SNLLYGPGAK SGPKDPQEVR IVGAVLPDMH GEPVEIVMPP VSVKSPADDD KAHPVNAAML PVKVFRDDKG ERAFETDVTT PGNKRRRIRF FR
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