Gene Caci_8495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8495 
Symbol 
ID8339875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9851184 
End bp9852239 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID644961582 
Productglycosyl transferase family 2 
Protein accessionYP_003119159 
Protein GI256397595 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.796901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTG TCAGCGTCGT GATTCCGTGC TACCGGTACG GGCACTTCTT GGCGGACTGC 
GTGCGCAGCG TTCTGGACGA ACAGCCTGGC GTGGATGTGC GGGTCCTGAT TATCGACGAC
GCCTCGCCCG ACGACTCGGC CGACAAGGCG CGGGAGTTGG CGGCGGCGGA TCCGCGTATT
TCGGTGGCGG TGCACGAGGC CAACAAGGGG CACATCGCCA CGTACAACGA GGGACTTCTG
GAGTGGGCTG ACGCGGACTA CAGCGTGTTG CTGTCGGCCG ATGACCGGCT GACGCCCGGC
GCCTTGGTGC GCGCGACGGC ACTGCTGGAC GCGCATCCTG CGGTCGGCTT CGTCTACGGG
CACCCGCTGA CCTTCCAGGA CGGCGAACCC CTGCCTCCGG CGCGCGGCGC TGACTGGCAG
AGCGGACAGT GGGCCGTCCG GCCGGGACTG TGGTGGCTGC GGCGGCGTTT CCGCACGGCG
GAGGGCTGCA TCACCTCGCC GGAGGTGGTG ATCCGAACGT CGGTGCAGAA GCGCATCGGC
GGCTACGACC CCGCACTCCC GCACTCGGGC GACATCGAGA TGTGGATGCG CGCGGCATCG
GTAGCCGGCG TGGGCCACAT CCGCGGCGCG GACCAGGCGT ACTACCGCCG CCACGGAGCA
AACATGTCGA CGGTCGACTT CGGCGGCCAA CTCGACGACC TCCACCAACG CCGCGCAGCC
TTCGAATCAG TCCTGGTGAA ATGCGGCGAC GCCCTCCCCG CAGCCGACAC CTGGGCCGCG
GACATGCGCC GAAAGCTGGC CCGCCAGGCA CTACGCCGAG CGGTCCGCGC CTATGACAAA
GGCCTGACGA ACACAGTCCC GGTCGCCGAG CTGATCGCGT TCGCCGAAGA CTGCTGGCCG
GACTACCGCC GCCTGCCGGA GTACGCAGGC CTGCGCGTGC GCAAGGCGGT CGGCGAGCGA
GCGATGCCCT ACCTGCGACC GCTGGTGGTC AGCGCGGCCG TGAACCGGGG GCGGGAGTGG
ATGTGGTGGC AGTCGTGGCG GCGGCGGGGG TGGTAG
 
Protein sequence
MGSVSVVIPC YRYGHFLADC VRSVLDEQPG VDVRVLIIDD ASPDDSADKA RELAAADPRI 
SVAVHEANKG HIATYNEGLL EWADADYSVL LSADDRLTPG ALVRATALLD AHPAVGFVYG
HPLTFQDGEP LPPARGADWQ SGQWAVRPGL WWLRRRFRTA EGCITSPEVV IRTSVQKRIG
GYDPALPHSG DIEMWMRAAS VAGVGHIRGA DQAYYRRHGA NMSTVDFGGQ LDDLHQRRAA
FESVLVKCGD ALPAADTWAA DMRRKLARQA LRRAVRAYDK GLTNTVPVAE LIAFAEDCWP
DYRRLPEYAG LRVRKAVGER AMPYLRPLVV SAAVNRGREW MWWQSWRRRG W