| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8451 |
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| Symbol | |
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| ID | 8339831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9781888 |
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| End bp | 9784308 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961538 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003119115 |
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| Protein GI | 256397551 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000113754 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCCGA CTCCTCCTTA TCAGCAAAAC CCCGTCACGG GTGGTGTGTC CACACCAGAC
CCGGTACTCG GTGCTGCCGG TAAGGAGAAC GACACTATCC CGGCAACGCT GGAGAGACTG
ATCTCGGTTC CCGCGTCGCG TGCGGAGCGT GTGACGCATG TGCGCGTCGT TCCGGCCCGG
GACGCGGTGC ACGACGAGTG GCCGGAGTGG GCCGACGAGG CCGTTGTGCA GGGGTTCCGC
GACGGCGGCG GCGTCCCGCG GCCCTGGCGG CACCAGGTCG CCGCGGCCGA GGCGGCGCGC
GAGGGGCGGC ATGTGACGCT CGCCACCGGC ACCGCCTCCG GCAAGTCGAT GGGCTTCCAG
CTGCCGGCGC TGACCGCGAT CCGCGAGAAC GCGGGCACCA CGCTGTACCT GGCGCCCACA
AAAGCGCTGG CAGCGGACCA ACTCAGACGT CTCACTCGTT TGGACGTACC GGGGGTCCGC
GCCGGGCTCC TGGACGGCGA CACGGACGCC GAAGCCCGCG ACTGGGTACG TCAGCACGCG
AACTATGTCC TGAGCAATCC CGACATGCTG CACTACTCGA TGCTGCCGGG ACACGCGCGC
TGGGCGTCCT TCCTCCGCAA ACTGCGTTAT GTCGTCATCG ACGAGTGCCA TACCTATAAA
GGTGTCTTCG GCTCACATGT GGCGGCCGTC TTGCGCAGGC TTCGCCGCAT CTGTGCGCGC
TACGGCTCCA GTCCGACTTT CATACTGGCG TCGGCCACGA CCGCCGACCC GGCTGTGTCG
GCCTCGCGGC TCACCGGGGT TGAGGTCTCG GCGGTCACCG ACGATTCCTC TCCGCGGGGT
CCACTGGTGT TCGCCCTATG GGAACCTCCC CTGACGACCC TTATCGGGGA ACGCGGAGCG
CCGGTTAGGC GCTCCGCGAC TGCGGAGGCC GCGGACTTGC TGACGGACTT GGTCCTGGAC
GACGTCCGCA CAGTGGTCTT CACCCGCTCC CGGCGAGGCG CCGAACAGGT GTCGATGCAG
ACACGCGATT ACCTAGAGGA GCGACGGACC GGGTACGGCA AGCGCATCGC TGCGTACCGC
GGCGGATACC TGAAGACCGA GCGCCGCGCC CTGGAAGCCG CCCTGCACAT GGACCCGACC
AAGGACGGCG CCCTCGTCGG ACTGGCCGCC ACCACCGCGC TCGAACTCGG CGTGGACGTC
GCAGGGCTCG ACGCCGTCCT GATGGCCGGG TTCCCCGGTA CCCGCGCCTC CCTCTGGCAA
CAGGCGGGTC GCGCTGGGCG CGCCGGACAG GGAGCGCTCG CGGTCCTCAT CGCGCGCGAC
GACCCGCTGG ACACCTACCT GGTCCACCAC TCCGAGTCGA TCTTCGACCG GCCGGTCGAG
GCCTCCGTCC TGGACCCGGA CAACCCCTAC GTCCTGGCGC CGCACCTGTG CGCCGCCGCA
GCGGAACTCC CCCTAACCGA TAGCGACTTG GAACTCTTCG GCCCGACCAC GGAGTCCCTG
CTGACCGACC TCACCCGCCG CGAGTACCTG CGCCGCCGTC CGACTGGCTG GTACTGGACC
CGGCGCGAGC GTCCCTCCGC GCTGACGGAC CTGCGCGGTA CCGGCGGCGC GTCGGTCCGC
ATCGTGGAGG ACCAGACCGG CCGCCTGCTC GGGACCGTGG ACGAGGGCGC GTCGCACTCC
ACGGTGCACG ACGGCGCCGT GTACCTGCAC CAGAGCCACA CCTACCTGGT GGACAAGCTG
GACCTGGAGC AGAACATAGC GCTGGTCCAC CGCGCGAACC CGGACTACAC CACGATGGCC
CGCGACGTGG TCCAGGTGAG CATCCTGGAC ACGGAGCAGA CCCAGGACTG GGGCGACGCG
TCCCTGCACT TCGGCTCGGT CGAGGTGAGC ACGCAGGTGG TCTCCTACCT GAAGCGCAAG
GCCGGCACCG GCCAGATCAT CGAGACCAAG CCGCTCGAAC TGCCCGAACG CGTCCTGCGC
ACCCGCGCCG TGTGGTGGAC CGTCGACCCC GCCGCCCTGC GCGACGCCGA ACTCGACGCC
GCGATGAGCG CCGGCGCCGC GCACGCCGCG GAGCACGCCT CCATCGGCCT CCTGCCGCTG
TTCACGCCCT GCGACCGCTG GGACATCGGC GGCGTCTCGG TCCCGCTGCA CCCGGACACC
GAGCGGCTGA CGGTGTTCGT CTACGACGGC CACCCCGGCG GTGCGGGCTT CTCCGAGCGG
GCTTACGGGG CGGCCGTCGC GTGGCTGACG GCGACGCGGG ACGTGATCAC GGCGTGCGAG
TGCCTGGAGG GCTGCCCGTC GTGCGTGCAG TCGCCGAAGT GCGGCAACGG GAACAACCCT
CTGGACAAGG CCGGGGCGGC CCGGTTGCTG AACCTGGTCC TGACCTGCGC GCAGGACGGG
CCCCCGCCCG GAACCCGGTA G
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| Protein sequence | MSPTPPYQQN PVTGGVSTPD PVLGAAGKEN DTIPATLERL ISVPASRAER VTHVRVVPAR
DAVHDEWPEW ADEAVVQGFR DGGGVPRPWR HQVAAAEAAR EGRHVTLATG TASGKSMGFQ
LPALTAIREN AGTTLYLAPT KALAADQLRR LTRLDVPGVR AGLLDGDTDA EARDWVRQHA
NYVLSNPDML HYSMLPGHAR WASFLRKLRY VVIDECHTYK GVFGSHVAAV LRRLRRICAR
YGSSPTFILA SATTADPAVS ASRLTGVEVS AVTDDSSPRG PLVFALWEPP LTTLIGERGA
PVRRSATAEA ADLLTDLVLD DVRTVVFTRS RRGAEQVSMQ TRDYLEERRT GYGKRIAAYR
GGYLKTERRA LEAALHMDPT KDGALVGLAA TTALELGVDV AGLDAVLMAG FPGTRASLWQ
QAGRAGRAGQ GALAVLIARD DPLDTYLVHH SESIFDRPVE ASVLDPDNPY VLAPHLCAAA
AELPLTDSDL ELFGPTTESL LTDLTRREYL RRRPTGWYWT RRERPSALTD LRGTGGASVR
IVEDQTGRLL GTVDEGASHS TVHDGAVYLH QSHTYLVDKL DLEQNIALVH RANPDYTTMA
RDVVQVSILD TEQTQDWGDA SLHFGSVEVS TQVVSYLKRK AGTGQIIETK PLELPERVLR
TRAVWWTVDP AALRDAELDA AMSAGAAHAA EHASIGLLPL FTPCDRWDIG GVSVPLHPDT
ERLTVFVYDG HPGGAGFSER AYGAAVAWLT ATRDVITACE CLEGCPSCVQ SPKCGNGNNP
LDKAGAARLL NLVLTCAQDG PPPGTR
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