Gene Caci_8284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8284 
Symbol 
ID8339663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9595633 
End bp9596301 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID644961370 
Producthypothetical protein 
Protein accessionYP_003118948 
Protein GI256397384 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.764991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.727752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TGATCGTCAT TGCGAAGGCG CCGGTCCCAG GACGTGTGAA GACCCGGCTG 
ACGCCGCCGT TCACGCCGGA GCAGGGCGCC GCGCTGGCCG GTGCGGCGCT CGCCGACACG
TTGGAAGCCG TTGCCACCGC ACGCTTTCCT CTCTCGGTGC TGGCGCTGGA GGGAGATTCG
GCGTTGGTCG CCGTCCCGGC CGGCTTCGCG GTGGTCCCGC AGGTCGGCGG CGGCCTCGAT
CGGCGGCTGG CTGCGGCGTT CCGAGAGGCG GCGATCCTCG ATCCCGGTCC GGCGCTCCTG
ATCGGGATGG ACACGCCGCA GGTGACCGGA CCGCTGCTGG AGGCGTGCAT GCCCACGGCG
TGGGAGGACG CGACGATCGG TCTGGCCGAG GACGGCGGGT TCTGGTCGCT GGGCTTCAGC
CGTCCGCGCG AGGTGGATCT CGACGGGCTG TTGCTCGGCG TGCCGATGTC CACGGATACC
ACTGGCGCCG TACAGCTCGC CCGTCTTACC GATGCTGGAC TCAGGGTTCG CATGCTGCCG
GTGCTGCGGG ACGTCGACAC CGTCGCCGAT CTGCCTGCCG TGGCGGCTGC GGCGGCTCCG
GTGTCGCGTT TCGCGGCTGT GGCGCATGCC GTCGGCGTTG CCGGTACGAC GCTCCCGGTT
CCGGCGTGA
 
Protein sequence
MSTLIVIAKA PVPGRVKTRL TPPFTPEQGA ALAGAALADT LEAVATARFP LSVLALEGDS 
ALVAVPAGFA VVPQVGGGLD RRLAAAFREA AILDPGPALL IGMDTPQVTG PLLEACMPTA
WEDATIGLAE DGGFWSLGFS RPREVDLDGL LLGVPMSTDT TGAVQLARLT DAGLRVRMLP
VLRDVDTVAD LPAVAAAAAP VSRFAAVAHA VGVAGTTLPV PA