Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8284 |
Symbol | |
ID | 8339663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9595633 |
End bp | 9596301 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961370 |
Product | hypothetical protein |
Protein accession | YP_003118948 |
Protein GI | 256397384 |
COG category | [S] Function unknown |
COG ID | [COG3222] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.764991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.727752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC TGATCGTCAT TGCGAAGGCG CCGGTCCCAG GACGTGTGAA GACCCGGCTG ACGCCGCCGT TCACGCCGGA GCAGGGCGCC GCGCTGGCCG GTGCGGCGCT CGCCGACACG TTGGAAGCCG TTGCCACCGC ACGCTTTCCT CTCTCGGTGC TGGCGCTGGA GGGAGATTCG GCGTTGGTCG CCGTCCCGGC CGGCTTCGCG GTGGTCCCGC AGGTCGGCGG CGGCCTCGAT CGGCGGCTGG CTGCGGCGTT CCGAGAGGCG GCGATCCTCG ATCCCGGTCC GGCGCTCCTG ATCGGGATGG ACACGCCGCA GGTGACCGGA CCGCTGCTGG AGGCGTGCAT GCCCACGGCG TGGGAGGACG CGACGATCGG TCTGGCCGAG GACGGCGGGT TCTGGTCGCT GGGCTTCAGC CGTCCGCGCG AGGTGGATCT CGACGGGCTG TTGCTCGGCG TGCCGATGTC CACGGATACC ACTGGCGCCG TACAGCTCGC CCGTCTTACC GATGCTGGAC TCAGGGTTCG CATGCTGCCG GTGCTGCGGG ACGTCGACAC CGTCGCCGAT CTGCCTGCCG TGGCGGCTGC GGCGGCTCCG GTGTCGCGTT TCGCGGCTGT GGCGCATGCC GTCGGCGTTG CCGGTACGAC GCTCCCGGTT CCGGCGTGA
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Protein sequence | MSTLIVIAKA PVPGRVKTRL TPPFTPEQGA ALAGAALADT LEAVATARFP LSVLALEGDS ALVAVPAGFA VVPQVGGGLD RRLAAAFREA AILDPGPALL IGMDTPQVTG PLLEACMPTA WEDATIGLAE DGGFWSLGFS RPREVDLDGL LLGVPMSTDT TGAVQLARLT DAGLRVRMLP VLRDVDTVAD LPAVAAAAAP VSRFAAVAHA VGVAGTTLPV PA
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