Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8165 |
Symbol | |
ID | 8339544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9469645 |
End bp | 9470739 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961251 |
Product | ABC transporter related |
Protein accession | YP_003118829 |
Protein GI | 256397265 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTG TCGTTTATCA GGACGCGTCC TGCGTCTACC CGGGCGCCGA GCGCCCCGCG GTCGACAAGC TGAACCTGGA GATCGCCGAC GGCGAGTTCC TGGTCCTCGT CGGCCCGTCC GGCTGCGGCA AGTCCACCTC GCTGCGCATG CTCGCCGGTC TGGAGGAAGT CTCCTCCGGC GGCATCTTCA TCGGCGACCG CGACGTCACG CACCTTCCGC CGAAGGACCG GGACATCGCG ATGGTGTTCC AGAACTACGC CCTGTACCCG CACATGACCG TCGCGGAGAA CATGGGCTTC GCGCTGAAGA TCGCCAAGGT CGACAAGGCC ACGATCACCA AGCGCGTCGA GGAAGCGGCC AAGCTGCTGG AGCTCACCGA GTACCTGGGC CGCAAGCCCA AGGCGCTGTC CGGTGGCCAG CGCCAGCGTG TCGCGATGGG CCGCGCGATC GTCCGGGAGC CCAAGGTCTT CCTCATGGAC GAGCCGCTGT CGAACCTGGA CGCCAAGCTG CGCGTGCAGA CCCGCACCCA GATCGCCTCG CTCCAGCGCC GCCTGGGCAT CACCACCGTC TACGTCACCC ACGACCAGGT CGAGGCCATG ACGATGGGCG ACCGCGTGGC GGTGCTGAAG GACGGCCTGC TCCAGCAGTG CGACACCCCG CGCGCGATGT ACGAGAAGCC GGCGAACGTG TTCGTCGCGG GCTTCATCGG CTCCCCGGCG ATGAACCTCG TCGAGGTGCC GATCGTCGAG GACGGCGTGA AGTTCAACGG CCTGACCATC CCGGTCTCCC GCGACGCCCT CGGCGTGGCC TCCAGCGGCG GCGCGTCGAC GCTGACCGTG GGCGTGCGCC CGGAGTCCTT CGACTTCGTC GGCGACGCCG TCGGCGCGAT CGCGGTCACC GTGCACCTGG TCGAGGAGCT CGGCGCGGAC GCGTTCGCGT ACTGCGCGGC GACCGTCGGC GAGAACGACG TGGACATCAT CGTCCGCGTG GACGCCCGCG CGGTGCCGAT GAAGGGCGAC ACGCTCTACG TGAAGCCGCG TGCGAGCGAG ACCCACCTGT TCTCCGCGAG TTCGGGCGAA CGCATCGAAG CGTAA
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Protein sequence | MAGVVYQDAS CVYPGAERPA VDKLNLEIAD GEFLVLVGPS GCGKSTSLRM LAGLEEVSSG GIFIGDRDVT HLPPKDRDIA MVFQNYALYP HMTVAENMGF ALKIAKVDKA TITKRVEEAA KLLELTEYLG RKPKALSGGQ RQRVAMGRAI VREPKVFLMD EPLSNLDAKL RVQTRTQIAS LQRRLGITTV YVTHDQVEAM TMGDRVAVLK DGLLQQCDTP RAMYEKPANV FVAGFIGSPA MNLVEVPIVE DGVKFNGLTI PVSRDALGVA SSGGASTLTV GVRPESFDFV GDAVGAIAVT VHLVEELGAD AFAYCAATVG ENDVDIIVRV DARAVPMKGD TLYVKPRASE THLFSASSGE RIEA
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