Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8148 |
Symbol | |
ID | 8339527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9447705 |
End bp | 9449378 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961234 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003118812 |
Protein GI | 256397248 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGGA CCAGACAGGG AAGGACGCCC GAGGTGACAG TGGCACTGCC TGAACGAGCC GAGCGCACGC CCCGCCCAGG CGCCTCGCGC CACGACGTCG TCGTGGTCGG CGGCGGCCAC AACGCCCTGG TGGCCGCGGC CTTTTTGGCG CGGGCCGGGA TGCGTGTCAC CCTGCTGGAA CGGCTGGACG CCGTCGGGGG CGCCGCGGTC AGCGCCTCGC CCTTCGCCGG CGTCGACGCC CGGCTGTCGC GGTACTCCTA CCTGGTGTCG CTGCTCCCTT ACACGATCGT GCGGAACCTG GAACTGGTCG TCGAGCTGCG CAGCCGCCCG GTCTCCTCCT ACACGCCGGT CCGCCGCTCC GGCGCCGACA CCGGCCTGCT GGTCGAGCGC CGCCCCGGCG CCGCGACCCA GGACAGCTTC CGCAAGCTCA CCGGGGGCGA GGCTGAGTAC CGCGCCTGGA CCCGGTTCTA TGAGCAGCTG GGCAAGCTGG CCCGGGCGCT GTCCCCGACG CTGTTGAACC CGCTGCTGGG CCGCGGGCAG CTGGAGGCGC TGGCCCGCGA GGAGGGCGCC GGACAGGCCT GGGAGTGGGT GTTCGAGCAG CCGATCGGCG CGGCCGTGGA GCGTTTCTTC GGCGACGACA CGGTCCGCGG CGTGGTGCTC ACCGACGCCC TGATCGGGAC CGACAGCTGG GCCGGCGACG CCAGCCTGAA GCAGAACCGG TGCTTCCTCT ACCACGTCAT GGGCAACGGC AGCGGGGAGT GGCGGGTCCC GATCGGCGGC ATGGGCAGCG TCACCGAGGC GCTGCACCGG TCGGCGGTGG ACGCCGGGGC ACGGATCCTC ACCGGGGTTG AGGTCACGCA CATCGAGCCG GACGCCGGCG GCGGCCGCGC GGAGGTCACC TACCGCGACC GCGAGGGCGC CGAGCAGGTC GTCCAGGCCG GATACGTGCT GGCCGGGGTG GCGCCGGCGG TCCTGACCCG GCTGCTCGGG CGCGGCGGCG CGGGCGCTCC GCAGCCGCAG GGCACCCAGC TGAAGATCAA CATGCTGCTG GACCATCTGC CGCCTCTGAA GTCCGGGGCG GACCCGCACG TGGCCTTCGC CGGGACGTTC CACATCGACG AGGGCGCGGC GCACCTGAGC CAGGCCTACA AGGACTCCCA CGCCGGCCGG CTGCCGGACC CGCTGCCCTC CGAGGTCTAC TGCCACACGC TCACGGACCG CTCGATCCTG GGCAAGGACC TGCTCAAGCG GCCCGACGTG CAGACCCTGA CGCTGTTCTC GCTGCACACC CTGCCGGGCG GCGCGACGAA GGAGGAGATG GTGCGCGCGG CGGTGGCGGG CCTGGACGCG TATCTGGAGG AGCCGCTGGC GGACTGCCTG CTGCGCGACG CGCACGGCGA GCCGTGCCTG GAGGCCAAGA CCACGGAGGA CCTGCAGGAG GAGCTGGCGA TGCCCGGCGG CCACATCTTC CACCGGGACC TGTCCTGGCC CTACGCCGAG CGCGCGGACC AGGTGGGCAA GTGGGGCGTG GAGACCGGGA TCGACAACGT CCTCATCTGC GGCGCTGGCG CGCGCCGCGG AGGCGGTGTG TCCGGAATCC CCGGCCACAA CGCTGCACGT GCAGTTCTCG ACCGCGTCGC CGACGCGGGT CGTAGGCGCA GCAGCGGGAT ATGA
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Protein sequence | MIGTRQGRTP EVTVALPERA ERTPRPGASR HDVVVVGGGH NALVAAAFLA RAGMRVTLLE RLDAVGGAAV SASPFAGVDA RLSRYSYLVS LLPYTIVRNL ELVVELRSRP VSSYTPVRRS GADTGLLVER RPGAATQDSF RKLTGGEAEY RAWTRFYEQL GKLARALSPT LLNPLLGRGQ LEALAREEGA GQAWEWVFEQ PIGAAVERFF GDDTVRGVVL TDALIGTDSW AGDASLKQNR CFLYHVMGNG SGEWRVPIGG MGSVTEALHR SAVDAGARIL TGVEVTHIEP DAGGGRAEVT YRDREGAEQV VQAGYVLAGV APAVLTRLLG RGGAGAPQPQ GTQLKINMLL DHLPPLKSGA DPHVAFAGTF HIDEGAAHLS QAYKDSHAGR LPDPLPSEVY CHTLTDRSIL GKDLLKRPDV QTLTLFSLHT LPGGATKEEM VRAAVAGLDA YLEEPLADCL LRDAHGEPCL EAKTTEDLQE ELAMPGGHIF HRDLSWPYAE RADQVGKWGV ETGIDNVLIC GAGARRGGGV SGIPGHNAAR AVLDRVADAG RRRSSGI
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