Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8089 |
Symbol | |
ID | 8339467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9382218 |
End bp | 9383756 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961174 |
Product | integral membrane protein |
Protein accession | YP_003118753 |
Protein GI | 256397189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCC AGCAGCCCGG CGAGGTCCCG GTCGCGACCC TCGACCTCGC CGCGACCCTG CCCGAGCTGG CCGAGGTCGC CCCGGATCTG TCGGCCGCCG ACATAGAGAT GTTCACGCCG GTCCGCCCGA TGGCTCCGGC CCGCCCGGAG TCCGAGACCG CGCGCCTGCT GCGCCGCGTC GGCGAGGGCA CCGAGGCCAC GGGACGCGCC ATGGGCCGCG TCGGCGGCTT CGTCGGCCAC CGCATCCGCA AGTACACCGA GTCCGGCGGC GCCCGGGAGT CCGGGCTGTC CCGCCTGATC GAGCTGCACG CCGTGAACAC CGCCGGCGAC CTGCTGATCA CCCTGGCGCT GGCGCAGTCG GTGTTCTTCG GCGTGCAACC GGGGCAGGCG CGCGGCAAGG TGGCGCTGTA CCTGGTGGTC ACGATGGTGC CGTTCGTGCT GCTGGCACCG GTCATCGGCC CGCTGCTGGA CCGCTTCGGG CACGGCCGCC GGCTGGCGAT GGCGGTCACC ATGGCCGCGC GCCTGGTGCT GGCGCTCATC ATGGCGCGCA CCGTGAGCGG GGACGCCAAC CTGGCGCTCT ACCCGGCCGC GTTCGGCTGT CTGGCGGCGT CCAAGGCCTA CGGCGTGACC CGCAGCGCGG TCATCCCCCG CCTCGTGCCC CAGGGCAGCA CCCTGATCAA GGCGAACTCG CGCACCTCGA TGGCCAGCAT CATCGCCACC TTCGTCTTCG CCCCGATCGG CGGGCTGCTG GTGCACCTCG GCGCCGCCTA CTGCCTGATC GGCGCGGCAC TGGTCTTCGC GCTCGGCGCG TACCTGGCGA TCCGGCTGCC GTCGCATGTG GACTCCGCCG AGGGCGAGCA GAAGGCGCAG CTGAAGAAGC GGGATCGGAA CATGGACCCC CGCCTGGAGG AGACCATGCC GAACCTGCGG CTGCGCTCGG TGGGCCCGTC GGTCGTGCTG GCCCTGCGCG CCAACGCCGC GTTCCGCTGC TTCTCCGGCT TCCTGACCAT CTTCATGGCG TTCCTGGTCC GCTACCACCC GCTGGCCGGC TACAAGGACC TGGTCGCGAT CGGCATGATC GCCGGCGCCG CGGCCGTCGG CAACGCCGTG GGCACCTCGC TGGGTTCGGT GCTGAAGGCC CGCGCGCCGG AGGGCGTGAT CTCCGCGATG CTGGCGCTGA CCACCGGCGC GGTTCTGGCG TGCGCCTTCT ATTACAACCT GATCACGGTA CTCACCGTAG CCGCGGTCGC CGCCATGAGC GCTGCGCTGG CCAAACTCTC CCTGGACGCC CTTCTGCAGC GCGACACCCT CGAGCGCGTG CGCACCTCGG CCTTCGCCCG GTCTGAGACA CTGTTGCAGC TGGCCTGGGT GGTCGGCGGA GGCCTGGGGA TCGCGATGTC CTACCCCGAC AACGGCAACG GGACGTTCGC GTTCATCGTC GCGGCCGTCG CGTTGCTGAC GGTGTGCGTG GTGACGCTCA AGGCTCTCTC GGACCTGCGC TTCGTGGCGC CCAATCCCGC CCAAAGTCTC GGAGTCTGA
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Protein sequence | MAAQQPGEVP VATLDLAATL PELAEVAPDL SAADIEMFTP VRPMAPARPE SETARLLRRV GEGTEATGRA MGRVGGFVGH RIRKYTESGG ARESGLSRLI ELHAVNTAGD LLITLALAQS VFFGVQPGQA RGKVALYLVV TMVPFVLLAP VIGPLLDRFG HGRRLAMAVT MAARLVLALI MARTVSGDAN LALYPAAFGC LAASKAYGVT RSAVIPRLVP QGSTLIKANS RTSMASIIAT FVFAPIGGLL VHLGAAYCLI GAALVFALGA YLAIRLPSHV DSAEGEQKAQ LKKRDRNMDP RLEETMPNLR LRSVGPSVVL ALRANAAFRC FSGFLTIFMA FLVRYHPLAG YKDLVAIGMI AGAAAVGNAV GTSLGSVLKA RAPEGVISAM LALTTGAVLA CAFYYNLITV LTVAAVAAMS AALAKLSLDA LLQRDTLERV RTSAFARSET LLQLAWVVGG GLGIAMSYPD NGNGTFAFIV AAVALLTVCV VTLKALSDLR FVAPNPAQSL GV
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