Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7949 |
Symbol | |
ID | 8339327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9221571 |
End bp | 9222686 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961034 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_003118613 |
Protein GI | 256397049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCC TGGACCTCAC ACAGAGCGCC GCCCGCCTCA CCGCGGCGCT CGTCGACATC GAATCCGAGA GCGGGAACGA GAAGGCGCTC GCCGATGCAG TCGAGGAGGC GCTGCGCAAG TATCCGCATC TGGAAGTACT GCGCGACGGC GACTCGGTGC TGGCGCGCAC CAACCTCGGC CGCGCCGAGC GCGTGATCCT GGCCGGGCAC CTGGACACCG TGCCGATCGC CGTGGACAGC ACGGGGCGCC GCAACGTCCC CTCGCTCCTT CAGGGCGACT GGGAGACCGG CACGCTGCGC GGCTGCGGCA CCTCGGACAT GAAGGCCGGC GTCGCGGTCC AGCTGGTGCT GGCCGCCACC CTCGCCGAGC CGAACCGCGA TGTGACGTAC GTGTTCTACG AGTGCGAGGA AGTCGAGGCC GAGCGCAACA GCCTGGGCCG GCTGATCCGC ACCCGCCCGG AGTGGTTCGC CGCCGACTTC GCGGTGCTGC TCGAGCCGAG CAACAACATC GTCGAGGGTG GCTGCCAGGG CACGATGCGC GCCCGGCTGA CCTTCCGCGG CGCCCGCGCG CACTCGGCGC GCTCCTGGCT CGGCGACAAC GCGATCCACA AGGCCGGCGC GGCGATGCGG CGGCTCGCCG AGTACCAGCC GCGCCGGGTC GAGGTGGAGG GCCTGGAGTT CCGCGAGGGT CTGAACGCGG TCGGGATCAG CGGCGGCGTG GCCGGCAACG TCATCCCGGA CGAGTGCTCG GTCCTGGTGA ACTTCCGCTT CGCCCCGGAC CGCGGTCAGG ATGACGCGGA ACGTCATGTC CGGGAGGTCT TCGCGGATCT GGACGCTGAG ATCGTGGTCA CAGACTCCGC TCCGGCGGCG CGTCCGGGGC TGCATCTGCC GTTGGCGGCG GAGTTCGTCG GCGCGGTGAT GGAAGGCATG GACGCCGAGC CCACGGCGAA GTTCGGCTGG ACCGATGTCG CGCGCTTCGC CGAACTCGGC GTTCCCGGCG TGAACTATGG TCCGGGCGAG GGATCGCTGG CCCACAAACC GGATGAATCA GTGGACCTGG GGCAAGTTGT TCGATGCGCG GAGCGGATGA GAAGCTGGCT CGGCTCCGCG CCGTGA
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Protein sequence | MSGLDLTQSA ARLTAALVDI ESESGNEKAL ADAVEEALRK YPHLEVLRDG DSVLARTNLG RAERVILAGH LDTVPIAVDS TGRRNVPSLL QGDWETGTLR GCGTSDMKAG VAVQLVLAAT LAEPNRDVTY VFYECEEVEA ERNSLGRLIR TRPEWFAADF AVLLEPSNNI VEGGCQGTMR ARLTFRGARA HSARSWLGDN AIHKAGAAMR RLAEYQPRRV EVEGLEFREG LNAVGISGGV AGNVIPDECS VLVNFRFAPD RGQDDAERHV REVFADLDAE IVVTDSAPAA RPGLHLPLAA EFVGAVMEGM DAEPTAKFGW TDVARFAELG VPGVNYGPGE GSLAHKPDES VDLGQVVRCA ERMRSWLGSA P
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