| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7513 |
|---|
| Symbol | |
|---|
| ID | 8338883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8704698 |
|---|
| End bp | 8705678 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644960592 |
|---|
| Product | 5-dehydro-4-deoxyglucarate dehydratase |
|---|
| Protein accession | YP_003118179 |
|---|
| Protein GI | 256396615 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAC TCGTGGACCG GCTCGACGGC TTGCTGTTCT TCCCCGTCAC CCCGTTCGCC
CGCGGCGCCG GGGACCGTCC CGGAGGCGTG GACCTGGAGG TGTACCGCGA GCACCTGCGC
TCGCGGCTGG CCTTCCTGGA CGCCCCCGAG CGCCCCGGGC CCGCCGCGGT GTTCGCGTGC
TGCGGGACCG GCGAGTTCCA AGCGCTGGAC GTGGACGAGT TCGCCGAGTG CGTCCGGGCC
GCCGCCGAGG TCGCGGCCGG GCGGGTGCCG GTGGTGGCCG GCGTCGGCTA CGGCGCGGCG
CTGGCCGCCT CGTTCTCCGC CGCGGCCAAG GAGGCCGGCG CCGACGGACT GCTGGTGATG
CCGCCCTACC TGGTCGCCGG GGGAGCCGCG GGCCTGCGGG ACCACTACAC CGCGGTGGCC
GAGGCGACCG ACCTGGACCT GATCATCTAC CAGCGCGACA ACGTCACCTT CACCCCCGAG
GTGGTCGCCG ACCTGGCCGA GGTCCCGAAC ATCGTCGGGT TCAAGGACGG CAAGGGCGAC
CTGGACCTGA TGCAGCGGAT CGTCTCCGCC GTCCGGGACC GCCACGGCGA GGGCAAGCTG
ATGTACTTCA ACGGTCTGCC GACCGCCGAG ATGTCGCAGC TCGCCTACGC CGGCGTCGGC
GTCCCGGGGT ACTCCTCGGC GGTCTTCTGC TTCGTCCCCG ACGTCGCGCT GGCCTTCTAC
CACGGCTACC GCAACGGCGA CACGAGCCTG GTCAACGCGC TCCTGGACCG GTTCTACCGG
CCGCTGGTGG AGCTGCGCGC CAAGGCTCCC GGCTACGCTG TCGCCTTGGT GAAGGCCGGG
GTGCGGCTGG ACGGTCTGGA CGCCGGTCCC GTGCGGCCGC CGCTGACCGA AGCCGCCCCG
GAGCACGTGG CCCGGCTTCA GGAGTTGATC GACGAGGGAC GCCGGGTACT GACCGGGCAC
GGGATCGACA CGCTGGCGTA A
|
|---|
| Protein sequence | MQSLVDRLDG LLFFPVTPFA RGAGDRPGGV DLEVYREHLR SRLAFLDAPE RPGPAAVFAC
CGTGEFQALD VDEFAECVRA AAEVAAGRVP VVAGVGYGAA LAASFSAAAK EAGADGLLVM
PPYLVAGGAA GLRDHYTAVA EATDLDLIIY QRDNVTFTPE VVADLAEVPN IVGFKDGKGD
LDLMQRIVSA VRDRHGEGKL MYFNGLPTAE MSQLAYAGVG VPGYSSAVFC FVPDVALAFY
HGYRNGDTSL VNALLDRFYR PLVELRAKAP GYAVALVKAG VRLDGLDAGP VRPPLTEAAP
EHVARLQELI DEGRRVLTGH GIDTLA
|
|---|
| |