Gene Caci_7382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7382 
Symbol 
ID8338752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8567080 
End bp8567964 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID644960462 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003118049 
Protein GI256396485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.916295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTG ACACCGGGAC CGCCGGGCCG CCGGCCGGCG ACGCGCTCGC AACAGTCGAG 
GCTGGACTTG ACGCGCTGGA AACATCGGCG GAACCGGAGT CCAGCAGACT CAAGGATGTG
GCCGCGTCCG TCTTACCGCC GATCATCACC ATCGTGCTGA TCATCGCCGT CTGGCAGATC
CTCTACGCGG CGAAGATCTG GCCGGACTGG AAGCTGCCCG GACCCTCGCA GGTCTTCAGC
TCCCTGAAGG ACACCTTCGC CCACGACGAC GCTCTGGGAG CGGTCGGCCA CAGCATCGGC
CACGCCGCCG TCGGCTTCGG CGCCTCGGTC GCCCTGGGCA CTCCGCTGGG CATCCTGGTC
GGCCGGTTCA AGCCGGTCCG CGCGGGCATC GGGCCCATCT TGTCCGGATT GCAGTCCCTG
CCCTCGGTGG CCTGGGTCCC GCCGGCGCTG ATGTTCTTCG GTCCCTCCCC GGCCATGCTC
TACTCCGTCG TCCTGCTCGG CGCGGTGCCC TCCATCGCGG TCGGCGTCAT GTCAGGGCTG
GACCAGGTGC CGCCGCTGTA TCTGCGCGTC GGCCACAACA TCGGCGCCCG CGGCCTGGCC
TCGGTGCGGC ACGTGCTGCT GCCGGCCGCG CTGCCCGGCT ACCTCGCGGG CCTGCGGCAG
GGCTGGGCTT TCGCCTGGCG CTCGCTGCTG GCCTCGGAGA TCATCGTCCA GTCCGCGAGC
CTCGGGCACT CCCTGGGCTT CCTGCTGAAG AACTCGCAGG ACGGCAACGA CATGTCGGGG
GCGTTCGCGG CGATCGTGCT CATCCTGGCC GTCGGGGTGG CGGTCAACCA GCTGCTCTTC
GTGCCGCTGG AGCGGCGCGT GCTCAAGGCG AGGGGGTTGG CGTGA
 
Protein sequence
MAADTGTAGP PAGDALATVE AGLDALETSA EPESSRLKDV AASVLPPIIT IVLIIAVWQI 
LYAAKIWPDW KLPGPSQVFS SLKDTFAHDD ALGAVGHSIG HAAVGFGASV ALGTPLGILV
GRFKPVRAGI GPILSGLQSL PSVAWVPPAL MFFGPSPAML YSVVLLGAVP SIAVGVMSGL
DQVPPLYLRV GHNIGARGLA SVRHVLLPAA LPGYLAGLRQ GWAFAWRSLL ASEIIVQSAS
LGHSLGFLLK NSQDGNDMSG AFAAIVLILA VGVAVNQLLF VPLERRVLKA RGLA