Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7303 |
Symbol | |
ID | 8338672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8485007 |
End bp | 8486314 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960385 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_003117973 |
Protein GI | 256396409 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0823861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0111745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGG ACTCGGGGAA TGGGCGGTCC GGCAGGCGTG CGGCCGTCGG GCGGCGCCGG CGCATCGTCG GCGCCCGCTT CGCCGAGAGC GAAATCGGGC GCTGGCTCAC GGACAACGCC ATGGCCTCGG ACCTCTACCT GCTGCCCGCC CTCGGCATGG TGGCCGTCGG CTTCGGCATG CTGACCGTGG CCTTCCCCGA AGCCTGGACC CCGGCGATGC TGGCCCTCCC GGTCCTGGCC GGCGGCCTGC TGATGAAGCT GCGCGGGCAA CTGCTCCTGC TGGTGATCTG CATCGCGGTC CTGATGGCCG TGTCCTGGCA CCGCGAGCGC GCCGGCGTGG CCTTCGGCTC GGCACTGGCG GTCTTCGCCA CCGCGGCGCT GGTGATACTG ACGTCGCGCT CCCGCCTCCG GCTCGGCGTC CAGGGCACAC GCGGTGAGGC GATGTTGCTG GACCTGCGTG AGCGGCTGCG GGCCCAGGGC GTGGTGCCAC GCCTGCCGGC CGACTGGCAT GTCGATATGT CGATCAGATC AGCCGGTGGT CAGTCCTTCG CCGGCGACTT CCTCATCGCG GCCCTGTCCC ACCCGGCGTT CCCGGCCCAG CGCCGCCCCG TGCCGGTGGC CAACGCGGTC GGGACGAGCA GCGTGCCGGG ACTCGCGGCT GCTTCCGGAA CCTCCGCGGC ACCCGGCCCA GACCCCGCCG CCAATCCCCA TCCCACTCCC ACCGCCGACT TCGACGACGC GCCGACCCAA GGCCAGACCC TCGAACTCAG CCTCGTCGAC GTCAGCGGCA AAGGCCTGGC AGCGGGCACC CGAGCCCTCC TCCTGTCCGG AGCCTTCGGC GGCCTCCTCG GCACCGTCCC CTCCCGCGAC TTCCTCACCT CGGCGAACAA GTACCTCCTC CGCCAAGACT GGGACGAAGG CTTCGCCACA GCCGTCCACC TCGTCGTCGA ACTGGAAACC GGCCACTACC GCTTCCACAG CGCGGGCCAC CCACCCATCG CCCGCCTGAC CGCCAAAACC GGCCGCTGGT CCACCGAAGA AGCCGAAGGC CCCCTCCTAG GCATCCTCGA CGACGCAGAA TTCCCCGCCA CCGAAGGCTG CCTCGACAGA GGCGACGCCC TCCTCCTCTT CACCGACGGC CTCGTAGAAC GCCCCGGCCG CGACCTAGAC GAAGGCCTAG ACCGCCTCCT AGGCGCCGCC GAAACCCGCC TCACCACCAG CTTCGCCGGC GGAGCCGACC GCCTCATCAA CGAAGTAGCA CCCAACGTCA AGGACGACCG AGCCCTCGTA GTCGTCTGGC GAACCTAA
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Protein sequence | MTADSGNGRS GRRAAVGRRR RIVGARFAES EIGRWLTDNA MASDLYLLPA LGMVAVGFGM LTVAFPEAWT PAMLALPVLA GGLLMKLRGQ LLLLVICIAV LMAVSWHRER AGVAFGSALA VFATAALVIL TSRSRLRLGV QGTRGEAMLL DLRERLRAQG VVPRLPADWH VDMSIRSAGG QSFAGDFLIA ALSHPAFPAQ RRPVPVANAV GTSSVPGLAA ASGTSAAPGP DPAANPHPTP TADFDDAPTQ GQTLELSLVD VSGKGLAAGT RALLLSGAFG GLLGTVPSRD FLTSANKYLL RQDWDEGFAT AVHLVVELET GHYRFHSAGH PPIARLTAKT GRWSTEEAEG PLLGILDDAE FPATEGCLDR GDALLLFTDG LVERPGRDLD EGLDRLLGAA ETRLTTSFAG GADRLINEVA PNVKDDRALV VVWRT
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