Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7205 |
Symbol | |
ID | 8338573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8374997 |
End bp | 8375563 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960286 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117875 |
Protein GI | 256396311 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.61042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.776649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACGA GAGAGCGGCT CATCGAGAGC ACCCGGACAC TGTTGTGGGA ACGCGGCTAC GTCGCGACCA GCCCGAAGAA CATCCAGCAC CTGGCCGAGG CGGGTCAGGG CAGCATGTAC CACCACTTCT CCGGCAAGGA GGAGTTGGCG CGCGTCGCCA TCGACCGCAC CGCCGAGGAG ATGCGCGCGA GTGTGGACGC CGTGCTTTCG GGCCCGGGCA GCGCGCTGGA GCGGATTTCG GCGTACCTGC GGCGTGAGCG CGAGGTTCTG AAGGGCTGTC CGATCGGGCG GCTGACGCAG GACCCTGATG TCATGGCCAC GCCGATGTTG GTGGCGCCGG TCGAGGAGAC GTTCACGTGG CTGCGCTCGC GGCTGGCCGC GATTGTCGCC GAGGGCGTCG TCGCGGGCGA GCTGAGCGCG GCCATCGATC CGGTGATCAC CTCGGCCGCG ATCGTCGCCA CGTTGCAGGG CGGGTACGTG CTGGCCCGCG CCGACGACGA CCCGGCCGCC TTCCAGCAGG CGATCGAGGG GATCCTCGCG CTGCTCGGCG CTCTCTCCGT CCGCTGA
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Protein sequence | MSTRERLIES TRTLLWERGY VATSPKNIQH LAEAGQGSMY HHFSGKEELA RVAIDRTAEE MRASVDAVLS GPGSALERIS AYLRREREVL KGCPIGRLTQ DPDVMATPML VAPVEETFTW LRSRLAAIVA EGVVAGELSA AIDPVITSAA IVATLQGGYV LARADDDPAA FQQAIEGILA LLGALSVR
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