Gene Caci_7205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7205 
Symbol 
ID8338573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8374997 
End bp8375563 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID644960286 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117875 
Protein GI256396311 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.61042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.776649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACGA GAGAGCGGCT CATCGAGAGC ACCCGGACAC TGTTGTGGGA ACGCGGCTAC 
GTCGCGACCA GCCCGAAGAA CATCCAGCAC CTGGCCGAGG CGGGTCAGGG CAGCATGTAC
CACCACTTCT CCGGCAAGGA GGAGTTGGCG CGCGTCGCCA TCGACCGCAC CGCCGAGGAG
ATGCGCGCGA GTGTGGACGC CGTGCTTTCG GGCCCGGGCA GCGCGCTGGA GCGGATTTCG
GCGTACCTGC GGCGTGAGCG CGAGGTTCTG AAGGGCTGTC CGATCGGGCG GCTGACGCAG
GACCCTGATG TCATGGCCAC GCCGATGTTG GTGGCGCCGG TCGAGGAGAC GTTCACGTGG
CTGCGCTCGC GGCTGGCCGC GATTGTCGCC GAGGGCGTCG TCGCGGGCGA GCTGAGCGCG
GCCATCGATC CGGTGATCAC CTCGGCCGCG ATCGTCGCCA CGTTGCAGGG CGGGTACGTG
CTGGCCCGCG CCGACGACGA CCCGGCCGCC TTCCAGCAGG CGATCGAGGG GATCCTCGCG
CTGCTCGGCG CTCTCTCCGT CCGCTGA
 
Protein sequence
MSTRERLIES TRTLLWERGY VATSPKNIQH LAEAGQGSMY HHFSGKEELA RVAIDRTAEE 
MRASVDAVLS GPGSALERIS AYLRREREVL KGCPIGRLTQ DPDVMATPML VAPVEETFTW
LRSRLAAIVA EGVVAGELSA AIDPVITSAA IVATLQGGYV LARADDDPAA FQQAIEGILA
LLGALSVR