Gene Caci_7163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7163 
Symbol 
ID8338531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8336349 
End bp8337602 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content68% 
IMG OID644960244 
Producthypothetical protein 
Protein accessionYP_003117833 
Protein GI256396269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGT ATGAGAAAGT GCGGCGACGA CTTCGTTCGC TGGCCTTCGC CGGGGTTCTG 
CTCCCGGCTC TGCTGGTCCC CGCCGTCGCG GCGCAGGGCG CCTCGGGCTC GCCGCAGAGC
GTGCGCGGCT CGCACTCCGG CAGCCTGGCC ACGCCGAGCG CCGTGCCCGG CGGCGATCCC
TGGGTCGTCT CGCTCGGCGA CTCCTACATC TCCGGCGAGG GCGGCCGCTG GGCCGGCAAC
ACCGACCAGA GCAGCTCGAA GATCGACGCC CTGGGTCCCA CGGCGTACTT CGACAACAAG
GACCACACCG CCGAGCTGAT CCCCCGGTGC CACCGCTCGC TCTCGGCGGA GGTGCACATC
GGGATTGCGC ACAGCCTGAA CCTGGCGTGC TCCGGCGCGC GGACGTCGAC GTTCACCGAG
GGCGGCTACT TCAAGCCCGG GCTGGACTTC TACAACGTCG GCGGCCACCA GGGCCAGGCG
CTGATGCTCC GCGACTTCGC GCTGAAGAAC CGCGTCACGA TGGTCGCGGT CTCCATCGGG
GGCAACGACT TCGGGTTCGG CGACGTCGTC ACGTCCTGCG TCGAGCACTA CCTGGCCGGC
ACGCTGTGCA AGAACGATCT CGCGGTCACC AGCCACTTCA ACGCGGCCAA CGCCGCTCGG
ATCACCAAGG ACATCGCGTC GGCCCTGCGC AACGTGGGCC TGGCGATGGC CTCGGCCGGG
TACCCGGACA ACTCGTACAA GATCCTCGTC CAGAACTACC CCTCCCCCAT CCCGTTCGGC
GTCGACTTCC GCTACCCGGA GCACTACAAC CGGCAGTTCG TGGGCGGATG CGGCCTGTGG
AACGCGGACG CGGACTGGGC CCTGCAGACC GCCATGCCGA CGGTCACCCG CTCGATCGGC
GCCGCCATCG TCGACAGCGG CCTGAGGAAC ATCATCACCA TGGACGTCTC CCGGGCCGTG
GGCGGGCACA AGCTCTGCGA GAAGGGCGTC GGCCTGCTGG AGGAAGTCGG CCTCAACAGC
TGGAAGGATC CCGGCGCGGT CGACAAGACC GAGTGGATCA ACCAGATCCG GATCGTCACG
TTCGGGACGG ACTACTTCCA GCAGGAGTCG CTGCACCCCA ACTACTGGTC GCAGTTGGGC
TTGCGCAACT GCCTGCGGCA GGCGTACTCC GGCCCTGTGC CGCACGGAGG CGTCTGCGTC
ATCGCCCGCA AGGGTCTGAC ATTCCGCGGC GAACCCGAGA TGAGTCTGCT GTAA
 
Protein sequence
MRPYEKVRRR LRSLAFAGVL LPALLVPAVA AQGASGSPQS VRGSHSGSLA TPSAVPGGDP 
WVVSLGDSYI SGEGGRWAGN TDQSSSKIDA LGPTAYFDNK DHTAELIPRC HRSLSAEVHI
GIAHSLNLAC SGARTSTFTE GGYFKPGLDF YNVGGHQGQA LMLRDFALKN RVTMVAVSIG
GNDFGFGDVV TSCVEHYLAG TLCKNDLAVT SHFNAANAAR ITKDIASALR NVGLAMASAG
YPDNSYKILV QNYPSPIPFG VDFRYPEHYN RQFVGGCGLW NADADWALQT AMPTVTRSIG
AAIVDSGLRN IITMDVSRAV GGHKLCEKGV GLLEEVGLNS WKDPGAVDKT EWINQIRIVT
FGTDYFQQES LHPNYWSQLG LRNCLRQAYS GPVPHGGVCV IARKGLTFRG EPEMSLL