Gene Caci_7117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7117 
Symbol 
ID8338484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8279710 
End bp8281008 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content69% 
IMG OID644960198 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003117788 
Protein GI256396224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGGA CTGCCGCCAC CAGCCTGCTC CTTCGCCACG CCGACTTCCG TCGCTTCTAC 
ATAGGCGACG TTGCCGACCA GTTCGGTACG TCGGTGACGA GCGTCGGCGT GCCGTTGGTG
GCGATCGCGA CCCTGCACGC CGGGACGTTC GCGGTGAGCC TGCTGAGCAT GGCTGCGTGG
CTTCCGTGGC TGGTCATCGC GCTGCCGGTC GGGGTGTGGG TGGACCGGAC GCGGCACCGT
CCGGTGATGC TGTGCTCGGC GGTGGTGTCG GGGGTGTTGC TGGCGAGTGT TCCGCTGGTC
GGTGGTGGCA GCGGCGGCGT CGGCATCGGA TACCTCTTCG CCGTCACGCT GCTGGTCGGC
GCCGCGTCGG TGTTCTACCA GACCGCCTAC CGTGCCTACC TGCCGACGTT GGTCGCGCCC
GAGGATCTGG CCGAGGGCAA CGCGAAACTC CACGGCAGCG CCTCGGCCGC GCAGATCGTC
GGGCGCAGCG GCGGCGGGTT GTTCACGCAG GCGCTCGGCG GGCTCGACGT CATGTTCGTC
AACGCCTCGA CGTTCGTCGT GTCAGTGTTC TGTCTGGCGT CGATCCGCAT TCGCGAGGCG
CGCCCGGTGG AGCCGGCTGA GCGGGTGATG CGGCGGGAGA TCGCCGACGG ACTGCGGCTG
GTCGCGCGGG ATCCGTGGAT CAGGACGCTC ACGGTGTTCG GCGCGGTGTC GAACTTGGCG
TTGATGGCGT ATCAGTCGAT CCTGCCGGTG TTTCTGATCC GCGATGTCGG GCTCAGCGCG
GGTGGCGTGG GTCTGCTGGT CGCGGCGGCG AGTTCTGGCG GGGTGTGCGG TGCGTTCCTG
GTGCGGCGGG TCGCCGGACG GGTCGGCACG GCGCGTACCA CGCTGCTGTT CGAGGTCGGG
TTGGCGGTGC CCGCGATGCT GATCGCTTTG ACCACGAAGG GATTCGGGAC GCTTTGCTAC
CTCGTGGGGG CGTTCTGCGT CTCGGCCGGG GTGGTCGCGG GCAACGTCAT CAAATCCGGC
TTCTTCCAGG CGTATTGTCC GCCGCATCTG CTCGGCCGCG TGAACGCCAG CGCCTCGTTC
GTCAACTACG GGACGCTTCC GCTCGGGGCG CTGCTCGGCG GGGTGCTCGG CACGCTGGTG
GGCGTGCCGA GCGCGATGTG GATCGCTACG GCCGGTGTTC CGGCGGCGGG ACTGGTGCTG
TTGCTGTCGC CGATGCGTTC GGTGCGGGAT CTGCCGACGG CGGGGCATCA GGTTCGTCCC
TTGGTCAGTT CCGGCGGCCG CCTCCGCCGA ACAGGCTGA
 
Protein sequence
MRRTAATSLL LRHADFRRFY IGDVADQFGT SVTSVGVPLV AIATLHAGTF AVSLLSMAAW 
LPWLVIALPV GVWVDRTRHR PVMLCSAVVS GVLLASVPLV GGGSGGVGIG YLFAVTLLVG
AASVFYQTAY RAYLPTLVAP EDLAEGNAKL HGSASAAQIV GRSGGGLFTQ ALGGLDVMFV
NASTFVVSVF CLASIRIREA RPVEPAERVM RREIADGLRL VARDPWIRTL TVFGAVSNLA
LMAYQSILPV FLIRDVGLSA GGVGLLVAAA SSGGVCGAFL VRRVAGRVGT ARTTLLFEVG
LAVPAMLIAL TTKGFGTLCY LVGAFCVSAG VVAGNVIKSG FFQAYCPPHL LGRVNASASF
VNYGTLPLGA LLGGVLGTLV GVPSAMWIAT AGVPAAGLVL LLSPMRSVRD LPTAGHQVRP
LVSSGGRLRR TG