Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7117 |
Symbol | |
ID | 8338484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8279710 |
End bp | 8281008 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960198 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003117788 |
Protein GI | 256396224 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGCGGA CTGCCGCCAC CAGCCTGCTC CTTCGCCACG CCGACTTCCG TCGCTTCTAC ATAGGCGACG TTGCCGACCA GTTCGGTACG TCGGTGACGA GCGTCGGCGT GCCGTTGGTG GCGATCGCGA CCCTGCACGC CGGGACGTTC GCGGTGAGCC TGCTGAGCAT GGCTGCGTGG CTTCCGTGGC TGGTCATCGC GCTGCCGGTC GGGGTGTGGG TGGACCGGAC GCGGCACCGT CCGGTGATGC TGTGCTCGGC GGTGGTGTCG GGGGTGTTGC TGGCGAGTGT TCCGCTGGTC GGTGGTGGCA GCGGCGGCGT CGGCATCGGA TACCTCTTCG CCGTCACGCT GCTGGTCGGC GCCGCGTCGG TGTTCTACCA GACCGCCTAC CGTGCCTACC TGCCGACGTT GGTCGCGCCC GAGGATCTGG CCGAGGGCAA CGCGAAACTC CACGGCAGCG CCTCGGCCGC GCAGATCGTC GGGCGCAGCG GCGGCGGGTT GTTCACGCAG GCGCTCGGCG GGCTCGACGT CATGTTCGTC AACGCCTCGA CGTTCGTCGT GTCAGTGTTC TGTCTGGCGT CGATCCGCAT TCGCGAGGCG CGCCCGGTGG AGCCGGCTGA GCGGGTGATG CGGCGGGAGA TCGCCGACGG ACTGCGGCTG GTCGCGCGGG ATCCGTGGAT CAGGACGCTC ACGGTGTTCG GCGCGGTGTC GAACTTGGCG TTGATGGCGT ATCAGTCGAT CCTGCCGGTG TTTCTGATCC GCGATGTCGG GCTCAGCGCG GGTGGCGTGG GTCTGCTGGT CGCGGCGGCG AGTTCTGGCG GGGTGTGCGG TGCGTTCCTG GTGCGGCGGG TCGCCGGACG GGTCGGCACG GCGCGTACCA CGCTGCTGTT CGAGGTCGGG TTGGCGGTGC CCGCGATGCT GATCGCTTTG ACCACGAAGG GATTCGGGAC GCTTTGCTAC CTCGTGGGGG CGTTCTGCGT CTCGGCCGGG GTGGTCGCGG GCAACGTCAT CAAATCCGGC TTCTTCCAGG CGTATTGTCC GCCGCATCTG CTCGGCCGCG TGAACGCCAG CGCCTCGTTC GTCAACTACG GGACGCTTCC GCTCGGGGCG CTGCTCGGCG GGGTGCTCGG CACGCTGGTG GGCGTGCCGA GCGCGATGTG GATCGCTACG GCCGGTGTTC CGGCGGCGGG ACTGGTGCTG TTGCTGTCGC CGATGCGTTC GGTGCGGGAT CTGCCGACGG CGGGGCATCA GGTTCGTCCC TTGGTCAGTT CCGGCGGCCG CCTCCGCCGA ACAGGCTGA
|
Protein sequence | MRRTAATSLL LRHADFRRFY IGDVADQFGT SVTSVGVPLV AIATLHAGTF AVSLLSMAAW LPWLVIALPV GVWVDRTRHR PVMLCSAVVS GVLLASVPLV GGGSGGVGIG YLFAVTLLVG AASVFYQTAY RAYLPTLVAP EDLAEGNAKL HGSASAAQIV GRSGGGLFTQ ALGGLDVMFV NASTFVVSVF CLASIRIREA RPVEPAERVM RREIADGLRL VARDPWIRTL TVFGAVSNLA LMAYQSILPV FLIRDVGLSA GGVGLLVAAA SSGGVCGAFL VRRVAGRVGT ARTTLLFEVG LAVPAMLIAL TTKGFGTLCY LVGAFCVSAG VVAGNVIKSG FFQAYCPPHL LGRVNASASF VNYGTLPLGA LLGGVLGTLV GVPSAMWIAT AGVPAAGLVL LLSPMRSVRD LPTAGHQVRP LVSSGGRLRR TG
|
| |