| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6906 |
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| Symbol | |
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| ID | 8338272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7975935 |
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| End bp | 7977821 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644959993 |
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| Product | glycoside hydrolase family 16 |
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| Protein accession | YP_003117584 |
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| Protein GI | 256396020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00349487 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000227833 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCATCTA GTTCCAACGA CGCTGCACCC TGGTCGCGCC GTCAATTCCT TACAACCGCA
AGCGTTACTG CCGCCGTCGG GCTCATCGCT GCGCCCCGCG CCGCGGCTGG TCAGCCTTCG
GGTGCTTCGG CTGGCGCCGC GGTCGCACCG ACCATCACCA CGGCTGCCGC CTCAGGACCG
CCCAGCAGCG ACTATGTGTT GGTCTGGAAC GACGAGTTCA GCGGCACGAG CATCGACACC
AGCAAGTGGG GCTTCAACTG GCCGGACACG ATGCCCAACA CCCGGTTCTT CGTCGATGTC
AGCGCGTACA ACCCCAGCTA CGTCACCGCG CACGACGGCT ACGCGTGGAT CAAGACCGAC
GCCACTTCCA CCGTCATTGA CGGCGTGACC CTGCCGTACC AGACCGGGTT CCTGTCCACG
AAGGGCAAGT TCGAGTTCCA GTACGGCTAC GTCGAGACCC GCTTCAGACA TGCCGCCTCG
GCGACTCCCT CGGCTCCCGA ACACACCGGC ATCGGCGGCT ACCACGCGTT CTGGATGCTC
CCGCACTACA ACGACTCGTC TTCAACAACT TCGGGCACGC CGTCGCTGCA CGGCACGGAC
GTCAACGGCG CCGACGGGCG TGGCAGCGAG GTGGACATCA CTGAATGGGG CGCCAGCGGC
ACCTCTGTCA ACAACAGCGA ATTCTGGGGA GGCTACGGCA CCGGCGGCAC CGGCTTCACG
GGACCGCACC TGACGACCAC CAACAGCGAT CCGCAGGGCT GGCACACCTA CGGGCTTGAG
TGGACGCCGA CCAAGCTGGT CTTCTACCAG GACGGCGTCG TGACCAACAC CATCAGCAAC
ACCAACGCGT TCATCTCGTT CTACCCCGAG TTCCTGATGA TCCAGACCGG GATCGTCAAA
TGGCAGACGA CCCCCAACAA CCTGCCCGAC TACCTACAGA TCGACTACGT ACGCTGCTAC
CAGCTGCCCA ACGTCACCTA CCAGGCCGAG AGCCAGGCGC TGTCCGGGGG AGCGGGCGTC
AACACCAACC ACACGGGCTA CACCGGCACT GGGTTCGTCG ACGGCTTCGC CGCAAGCGTC
GGCGCGACCC TGACCACAAC CGTCAACACC TCGGCGACGG CAACCAAGAC CCTGACGATC
CGCTACTCCG CCGGACCGAT CAGCGGTGCT CCAACCAACC GAGTGCTCGG CCTCTATGTC
AACGGCACGA AGGTCAGGGA CGTGACCTTC ACCGGCACCG CGGACTGGAA CACCTGGGCG
AACAATACCC AGTCGATCAC GCTGCCCGGA GGAGCCGGCA ACACGATCGC GATCATCAGC
GAACAAACCG GCAATGCCAG CGGCGTCAAC ATCGACTACA TAGCACTGCC CAACAGCGCC
GACGTGGTCT CCGGAAACCG GGTCGTGAAC GCCGGCTTTG ACGACAACGC CGCCTCCTTC
GGCCTGGGGG CGAACACGAT CGCCGACATC GCGGGTTGGT ACGTCTGGTC GCCCACCGGC
TCGGACGACG ACGCCTCGTA CCTCGAGTAC GGTTCCGACT ACTCCAACGG ATGGAACGCG
GTCCACTACA AGGCTTCGAA CTACGTGGTC TACACGGGCC AGGACATCAC GCTGCCGAAC
GGCACCTACA ACCTCTCGGC CTACGTGCGA TCCAGCGGCG GCCAGAATGC CTGCTACCTC
GAGGCCAAGG GGTTCGGCGG GTCGGCGGTG CACCAGAACG TCACAGCGGA GTCGAAGTAT
AGGAAGGTGT CCATCAACGG GATCCACGTC ACCGACGGGA AGATCACGGT TGGTTTCTAC
TCCGACGCTC TTTCGGCACA GTGGCTCGCG TTCGACAACG TGCAGCTACT TCCGGCGACT
GGTCCGATCA CAGTGCCTGC GACCTGA
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| Protein sequence | MSSSSNDAAP WSRRQFLTTA SVTAAVGLIA APRAAAGQPS GASAGAAVAP TITTAAASGP
PSSDYVLVWN DEFSGTSIDT SKWGFNWPDT MPNTRFFVDV SAYNPSYVTA HDGYAWIKTD
ATSTVIDGVT LPYQTGFLST KGKFEFQYGY VETRFRHAAS ATPSAPEHTG IGGYHAFWML
PHYNDSSSTT SGTPSLHGTD VNGADGRGSE VDITEWGASG TSVNNSEFWG GYGTGGTGFT
GPHLTTTNSD PQGWHTYGLE WTPTKLVFYQ DGVVTNTISN TNAFISFYPE FLMIQTGIVK
WQTTPNNLPD YLQIDYVRCY QLPNVTYQAE SQALSGGAGV NTNHTGYTGT GFVDGFAASV
GATLTTTVNT SATATKTLTI RYSAGPISGA PTNRVLGLYV NGTKVRDVTF TGTADWNTWA
NNTQSITLPG GAGNTIAIIS EQTGNASGVN IDYIALPNSA DVVSGNRVVN AGFDDNAASF
GLGANTIADI AGWYVWSPTG SDDDASYLEY GSDYSNGWNA VHYKASNYVV YTGQDITLPN
GTYNLSAYVR SSGGQNACYL EAKGFGGSAV HQNVTAESKY RKVSINGIHV TDGKITVGFY
SDALSAQWLA FDNVQLLPAT GPITVPAT
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