| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6877 |
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| Symbol | |
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| ID | 8338243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7945280 |
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| End bp | 7946911 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644959965 |
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| Product | hypothetical protein |
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| Protein accession | YP_003117556 |
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| Protein GI | 256395992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0249011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CACGACGTAC TCTCGGAGTC GGAGCGCTCT CAGCCCTCGC ACTGCCCCTG
GTCGACCAGG GCCTGGCCCG GGCCGCCGGA TCCGGCGCCC ACGACGCGGC GGCGCCGGCC
GCGACCGGGC AGGCCGCGCC GGCGAAGGCG GCCGCTTCGG CCGTCGTGCC CTACCCGACG
GCCCCGTACC TGACCAAGAG CACCGCCTAC ACGCTGAGCG TGAACTCGCA GGCGATCGAC
GTGCGCAAGC ACTTCGACTA CTCGATCGCG CAGTTCTCGT ACTCTGGGAC GGCGACCTTC
ACGATCACGG CGTCGGAGAC CATCACCTCC TACAACATCA GCCCCCACAG TTACGGCGTC
AAAGCCACCA AAAGCGGGAA GACCCTCACC TTCTCGCTCA CCCAGACCCA GTCGCGGTAT
CTGGTGATCA AGGTCAACGG CTTGGAGAAC CTCGTCATCG CGGCCGACCC CCTGGAGGCC
GGCATCCCGG TGCCCAACGG CGGCAGCGTG AAGAACATCC TGGACTACTC GGGGATCGAC
AGAACGGGCA ACACGCTCAT GACGTCGAAG ATCCAGAAGG CCATCGACGA CGCGGCGGCC
CGCAGCGGCG GCGGCACGGT CTACGTTCCC GCCGGCGTCT ACAAGTTCAC GCAGATCGAG
CTGAAGAGCC ACGTCACCGT CTACCTCGCC GCCGGTGCGG TGCTGCGCGG CTCGTCCAAG
GTGGGCGACT ACGACTTCAG CGGCAAACAC TTCCACGCGG CGAACGTCCG CATCGTCGGC
GCCGCCAACG CCTCGATCAA GGGCCGGGGG ACCATCGACT CCAACGGCAG TGTGCTGACG
TCCGGACCGA GCGGGTCCAA CCGCGAGAAC ATCATCGCCT CGCTGAAGAA CTCGCAGGGA
ACGAAGCCGG ACACGCTGGT CTTCGAGGGC ATCACGCTGC GGGACGGCAC GACCTGGAAC
TTCAACCTCA AGGACTCGAC CCACGTCACG ATCACCAACG TGAAGATCTT CAACAACGTC
CACTGGATCC ACGGGGACGG CTTCGACCTG GTCAACGTCT CCCATGCCGT GGTGGACCAG
TGCCTGGCCT GCACCGGCGA CGACGCGTTC GACGCGAAGA GCTCCTCGAC GGAGCCGATG
ACGGACCTGG TGTATCAGAA CTCTGTCGCC TACACCCAGG CCGCCGGCAC CAAGCTCGGC
ATGCAGGGCG CGGGCGCCAT GAGCGACATC TGGTTCAAGA ACATCGACGT GATCCAGGGA
TACCGCGGGG TCAGCGTCTC CCACGACGAG GGCGGCGGTG CCTGGAGCGG CATCCACTTC
ACCGACATCC GCACCGAGAA GATCTACAAC AACGGCACGT CCGGCGAGTT CCGGACCGCG
CCGATCCTCA TCTGGACCGC GGAGTACTCG GGGTCGACCA GCGGGCCGAT CACCGGCGTG
GAACTGGTCC GGGTCAGCTT CGAGAACATC AACGGCTTCC ACTCGATCAT CCAAGGAGAG
AACAGCAAGA GCAAGGTCTC CAACGTCAGC TTCACGGATC TGACGATCAA CGGACGGCCG
GTCAAGAAGG CCTCCGACGG CCTGATCGAC ATCAACGCGA ACACCTCCGA CATCACGTTC
GCCGTCTCCT AG
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| Protein sequence | MNITRRTLGV GALSALALPL VDQGLARAAG SGAHDAAAPA ATGQAAPAKA AASAVVPYPT
APYLTKSTAY TLSVNSQAID VRKHFDYSIA QFSYSGTATF TITASETITS YNISPHSYGV
KATKSGKTLT FSLTQTQSRY LVIKVNGLEN LVIAADPLEA GIPVPNGGSV KNILDYSGID
RTGNTLMTSK IQKAIDDAAA RSGGGTVYVP AGVYKFTQIE LKSHVTVYLA AGAVLRGSSK
VGDYDFSGKH FHAANVRIVG AANASIKGRG TIDSNGSVLT SGPSGSNREN IIASLKNSQG
TKPDTLVFEG ITLRDGTTWN FNLKDSTHVT ITNVKIFNNV HWIHGDGFDL VNVSHAVVDQ
CLACTGDDAF DAKSSSTEPM TDLVYQNSVA YTQAAGTKLG MQGAGAMSDI WFKNIDVIQG
YRGVSVSHDE GGGAWSGIHF TDIRTEKIYN NGTSGEFRTA PILIWTAEYS GSTSGPITGV
ELVRVSFENI NGFHSIIQGE NSKSKVSNVS FTDLTINGRP VKKASDGLID INANTSDITF
AVS
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