| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6876 |
|---|
| Symbol | |
|---|
| ID | 8338242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 7943554 |
|---|
| End bp | 7945098 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644959964 |
|---|
| Product | glycoside hydrolase family 76 |
|---|
| Protein accession | YP_003117555 |
|---|
| Protein GI | 256395991 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.534141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AGACAGCACT GGCAGCGACC TGTACCGCCC TCCTGCTCGG CGTGACCGGC
GCCGTGATGC TGGCGCCCTC GGCCGTGGCC ACCGCCAGCC TGCCCTCCGC GACCACGGTC
TACCAGGACT GGAACAAGGC CTTCCTGGTG CAGGCCAACG GTGAGACCTT CTATAACAGC
GAGCTGAAGA GCAAAGGCAT CAAGCGCTCC ACCATGTGGA TCGCCGCCCT GGACATCCAG
GTCGCCCAGG ACCGCTACGA CCTCACGCAC TCGGCAGCCG ACCGGCAGGT GGCCGTGGAC
CTGGTCACCA CCTACATCAA GCACGAGGGC ACCGACTGGG CCTCCTGGGA CGGCTGGAAC
GACGACCTCG CGTGGGACAT CACAACGGTT CTGCGCGGCT ACCAGCAGAG CGGGAACACC
GCTTGGCTGA CCGTCGCCGA GGACCAGTTC GCCAAGACCT ACAACCGGGG ATGGTCCTCG
GCCGGCGGCG GCGGGATCTG GGAGCACGAC ACCAGCGGGA GCAAGTGCGC GCTCAGCAAC
GACCCGATGA TCAGCATCGC CTCGACGCTG TACCAGATCA CCGGCGACCA GGCGTACCTG
ACCAAGGCGA AGGCGATCTA CGCCTGGATG CGCAGCAAGG TCGTGAACAC CTCGACCGGC
GTGGTCAACG AGTGCGTGAG CATCCCGAAG GGGAAGAGCG GCCCGACCAC CCTGCTGAAG
TCGGACAACG CCTACAACGC GGGTTCCTGG ATCGAGGCGG CCGACAACCT CTACCGGATC
ACCGGCGACA CCCAGTACCG CGACGACGCG CAGCGCACCG CCGACCACTT CCTCAACCAC
GTCCCCATCG TGGCGAACAG CCAGGGCAAC AGCACGTCCT ACCAGTACTG GCTCTTCAAG
GGCATCGGCG ACTTCTGCAC TGACGCCAAC CTGTGCAGCC GCTACGACGC GTGGATGCGG
TCCAACGCCG CGAAGGCGTG GAGCGAGCGC GACAGCGACA ACGTCACCTG GAACAACTGG
AACAAGAAGA CTGACGAGCC GAACGCGGAT GCCTTCGAGA TGATCGGCAT GGTCGCGGTC
TTCCAGGCGC TGCCCGACAC CGCCGCCTCC CCCTTCAAGG GGACGTACGA GATCAAGAAC
GTGCACAGCG GCCTGTCGCT GGGCGCGAAG GGTGACTCCA CCGCCGCGTC GGCACCCATC
GTGCAGAACA AGGACACCAA GGACGCCAGC GCCTCGTGGT CGTTCGTCCA GGAGAGCAAC
GGCTACTACG AGATCAAGAA CGTTCGCAGC GGGCTGATCC TGGCGGTCAG CGGGACCCTC
GGCAAGCCGG GCTCCCTGGT CGTGCAGTCG CCGGCGGCCG GCATCCGCTC GGGCGAGGAC
CAGTGGATGC CCGTCAAGAA CTCCGACGGC ACCTGGTCGT TCTCCAACCG CAACAGCAAG
CTGGCCCTGG ACAACTACAC CGGGAGCACC GCGGCCGGCA ACCAGTACGG CCAGTGGACG
CCGACCGACG GCTCCGATCA GCGTTTCGAC CTGATCTCCC GCTGA
|
|---|
| Protein sequence | MKRKTALAAT CTALLLGVTG AVMLAPSAVA TASLPSATTV YQDWNKAFLV QANGETFYNS
ELKSKGIKRS TMWIAALDIQ VAQDRYDLTH SAADRQVAVD LVTTYIKHEG TDWASWDGWN
DDLAWDITTV LRGYQQSGNT AWLTVAEDQF AKTYNRGWSS AGGGGIWEHD TSGSKCALSN
DPMISIASTL YQITGDQAYL TKAKAIYAWM RSKVVNTSTG VVNECVSIPK GKSGPTTLLK
SDNAYNAGSW IEAADNLYRI TGDTQYRDDA QRTADHFLNH VPIVANSQGN STSYQYWLFK
GIGDFCTDAN LCSRYDAWMR SNAAKAWSER DSDNVTWNNW NKKTDEPNAD AFEMIGMVAV
FQALPDTAAS PFKGTYEIKN VHSGLSLGAK GDSTAASAPI VQNKDTKDAS ASWSFVQESN
GYYEIKNVRS GLILAVSGTL GKPGSLVVQS PAAGIRSGED QWMPVKNSDG TWSFSNRNSK
LALDNYTGST AAGNQYGQWT PTDGSDQRFD LISR
|
|---|
| |