Gene Caci_6843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6843 
Symbol 
ID8338209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7899347 
End bp7900264 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID644959934 
Productputative RNA methylase 
Protein accessionYP_003117525 
Protein GI256395961 
COG category[L] Replication, recombination and repair 
COG ID[COG1041] Predicted DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0223663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCCA CACCACCGGT CCCCGACAAA CCGCCGCTGT CCGTGTGGGC CACTGCCCAA 
GACGGTCCGC GGGCGCAGCG CCGGGGGCGC TACCTGCAGG AGTCGGAAGC GCATCCGGCG
AAGATGTTCC CGGCGATCGC CGCCCATGCG ATCGCCTCGT ACACCCGGCC TGGTGACCTG
GTCGTTGACC CCATGTGCGG GATCGGCACC ACGCTGGTCG AGGCTATGCA CCTGGATCGC
ATGGCCATCG GTGTGGAATA CGAGAAGCGG TGGGCCGACC TGGCCGTCCG CAACGTCGAG
CACGCCGTCG ATCAGGGTGC CACCGGGTAT GGCACCGTCG TGCAGGGCGA CGCCCGTGAG
GTCGATCGCA TCGTGGGAGC GGACGTACAT GGTCGGGCCG CACTGGTGCT GACTTCGCCG
CCATACGGTC CGGCGACTCA CGGCCACGTT CGGGGTTCGT CCGCCAGTGG CCAGCCCGGC
GTGCAGAAGC GGAACCATCA CTACGGCGAC GATCCCAACA ATCTGGCACA CCAAGGCGTC
GAGGACCTCA TCGAAGGCTT CACCCAGATT CTCACCGGTT GCAGAAAGTT GCTGCGTCCC
GGTGGCTTCC TGGTCATCAC CGCCCGGCCG TACCGCCGGA CGGGTCGCTT GGTCGACATC
CCTACCCTGG CTACCCAAGC GGCTATCGCT GCCGGCTACG TCCTGCACGA ACGCTGCATC
GCCCTGCTGG CGGCGACTCG CGACGACGGG CTGATGGCGC GGGCGTCCTT CTTTCAACTG
GTCAACGCCC GCAATGCCTT CGTCGCCGGC AGCCCCACGC ACGTCAGTGC GCACGAGGAA
GTCATCATTG CCCGGCACCA TGACGAGGAC GTCGGCTGCG CCTGTGTGCC TGCGGTTCCT
CCCGGGAGGG CCGCATGA
 
Protein sequence
MNATPPVPDK PPLSVWATAQ DGPRAQRRGR YLQESEAHPA KMFPAIAAHA IASYTRPGDL 
VVDPMCGIGT TLVEAMHLDR MAIGVEYEKR WADLAVRNVE HAVDQGATGY GTVVQGDARE
VDRIVGADVH GRAALVLTSP PYGPATHGHV RGSSASGQPG VQKRNHHYGD DPNNLAHQGV
EDLIEGFTQI LTGCRKLLRP GGFLVITARP YRRTGRLVDI PTLATQAAIA AGYVLHERCI
ALLAATRDDG LMARASFFQL VNARNAFVAG SPTHVSAHEE VIIARHHDED VGCACVPAVP
PGRAA