Gene Caci_6838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6838 
Symbol 
ID8338202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7894972 
End bp7895427 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID644959927 
Productprotein of unknown function UPF0066 
Protein accessionYP_003117520 
Protein GI256395956 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA TCATCCCGAT CGGACAGGTG GTCGGCGGCC GTGCCGAGCC GCGCGACGAC 
GACTGGGGCG GGGAGCAGGC CGTGATCCGG CTCGACGACC GCTTCGGTCC CGAGGCCCTC
GCCGGGCTGG ACGCCTTCTC GCACCTGGAG GTCGTCTACC AGTTCCATTT GGTGGACCCG
GAGAAGGTGC AGACCGGTGC CCGGCATCCC CGCAACAACA CCGAGTGGCC GCTGGTCGGC
ATCTTCGCCC AGCGCGGCAA GAACCGGCCG AACCGGATCG GCGTCTCCCG CTGCCGGCTG
GTGAAGGTCG AGGGCCGCGA CGTCCACGTC ACCGGACTCG ACGCCGTCGA CGGCACCCCG
GTCCTGGATC TGAAGCCGTA CATGGCGGAG TTCGGCCCGA TCGGCGAGGT GGCCCAGCCC
GAGTGGGCCA CCGAGCTGAT GCGGGAGTAC TACTAG
 
Protein sequence
MTNIIPIGQV VGGRAEPRDD DWGGEQAVIR LDDRFGPEAL AGLDAFSHLE VVYQFHLVDP 
EKVQTGARHP RNNTEWPLVG IFAQRGKNRP NRIGVSRCRL VKVEGRDVHV TGLDAVDGTP
VLDLKPYMAE FGPIGEVAQP EWATELMREY Y