Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6797 |
Symbol | |
ID | 8338161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7846780 |
End bp | 7847190 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644959886 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_003117479 |
Protein GI | 256395915 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.674674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACAAGCTCAC CCTCCTCAAC CCGCCCGGCC TGCACCCCAC CTCCGGCTAC GCGCACGTCA CCATCGCCGC CGCGGGCCGC ACCGCACACC TGGCCGGCTT GTGCCCGCTC GACGCCGACG AAAAAGTGGT CGCCCCCGAC CTGGACGCGC AGATCGACCA GGTCGTGGCG AACGGCCTGG CGATCCTGGA GGCGGCGGGC GCCACCCCGG CGGACGTGGT GCGCTCGGTG ATCTACGTGG TCAGCGACCA GAGCACGGTC CTGGCCGCAG CCTGGGCCCG CTTCATGGCA TCGCCGCTGG CGCCGGCGCT CCGGACGGCG AGCACACTGC TGGGCGTCGC GGCGCTCGGA TACGGCGGGC AGCTGGTCGA GGTGGACCTG ACCGCTGCGC TGGACGAGTG A
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Protein sequence | MTDDKLTLLN PPGLHPTSGY AHVTIAAAGR TAHLAGLCPL DADEKVVAPD LDAQIDQVVA NGLAILEAAG ATPADVVRSV IYVVSDQSTV LAAAWARFMA SPLAPALRTA STLLGVAALG YGGQLVEVDL TAALDE
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