Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6783 |
Symbol | |
ID | 8338147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7829729 |
End bp | 7830934 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644959873 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_003117466 |
Protein GI | 256395902 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.916687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.894439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGACA GTGTGACCGA GAGCCTGAAC CCCGCGGCGG ACCTGGACCA GTCGGCAGCC GAGAAGTCCA CTGACGTGCC GGGCCCGCGC AGCGGGAGCG CGCCGGGCTC CTCGAGGGCT TCCGGCGCTT TGGGCGCCTC CGATGCTTCA GGCGCCTCGG ACCCGCGCCG CAGCCCCGCC CACGACAGCG ACTTCCTGCG CGCCGCCCGC CGCGAGCCGG TCAGCCGCAC CCCGGTGTGG TTCATGCGCC AGGCCGGCCG TGCGCTGCCG GAGTACAAGA AGGTGCGTAC CGGGATCCCG ATGCTGGACG CCTGCCTGCG CCCGGACCTG GTGACCGAGA TCACCCTGCA GCCGGTGCGC CGCTACGGCG TGGACGCCGC CGTCCTCTAC AGCGACATCG TGGTCCCGCT CAAGGCGATC GGCGTGGAGG TGGAGATCGT CCCGAACGTC GGCCCGGTGA TCGCCCACCC GGTCCGCGAC CTGTCGGGGC TGGACCAGAT CCGGCCGCTG GACCCGGCCA CGGACCTGGC CTTCGCCACC GAGGCGGTGC GGCAGCTGGT CGGCGAGCTG GGCTCCACCC CGCTGATCGG CTTCGGCGGC GCCCCGTTCA CGGTCGCCAG CTACCTTATC GAGGGCGGGC CGTCGAAGAA CCATGAGAAG ACCAAGGCGA TGATGCTCGG CGCGCCGGAG CTGTTCGCCG CGCTGATGGA CCGCCTGGCC GACCTGACCG CCGGCTTCAT GCGGGTGCAG GTCGAGGCCG GCGCGAGCGT GGTGCAGCTG TTCGACTCCT GGGCCGGCGC GCTGTCCCCC CGGGACTACG AGCGCTACGT CATGCCGCAC AGCGCCAAGG TGCTGGACTC GCTGGCGGAC CTGGGCGTGC CGCGCATCCA CTTCGGCGTC GGCACCGGCG AGCTGCTGCC GCTGATGGCC GCCGCGGGCG CGGACGTGGT CGGCGTGGAC TGGCGGGTCC CGCTGGACGA GGCCTCGCGC CGCATCGGTC CGGACTACGC GGTGCAGGGC AACCTGGACC CGTCGGTGAT GTTCGCGCCG TGGCCGGTCA TCGAGACCCG GGTGCGCGAG GTCCTCGACG AGGGCTCGCG GACCCCGGGA CACATCTTCA ACCTGGGCCA CGGCGTGACG CCGGACATGG ACCCGGACCG GCTGGCCAGG GTCGTCGAGC TGGTGCACGA GGCGTCGGCG CGCTAG
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Protein sequence | MHDSVTESLN PAADLDQSAA EKSTDVPGPR SGSAPGSSRA SGALGASDAS GASDPRRSPA HDSDFLRAAR REPVSRTPVW FMRQAGRALP EYKKVRTGIP MLDACLRPDL VTEITLQPVR RYGVDAAVLY SDIVVPLKAI GVEVEIVPNV GPVIAHPVRD LSGLDQIRPL DPATDLAFAT EAVRQLVGEL GSTPLIGFGG APFTVASYLI EGGPSKNHEK TKAMMLGAPE LFAALMDRLA DLTAGFMRVQ VEAGASVVQL FDSWAGALSP RDYERYVMPH SAKVLDSLAD LGVPRIHFGV GTGELLPLMA AAGADVVGVD WRVPLDEASR RIGPDYAVQG NLDPSVMFAP WPVIETRVRE VLDEGSRTPG HIFNLGHGVT PDMDPDRLAR VVELVHEASA R
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