Gene Caci_6777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6777 
Symbol 
ID8338141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7823445 
End bp7824659 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID644959867 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003117460 
Protein GI256395896 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.492052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCAGA CCCAGAGGGC CGTGCGACAA GTCGTGTTCG TCGACGGCGT CCGTACCCCG 
TTCGGCAAGG CGGGCCCCAA GGGCGTCTAT GCCGAGACCA GGGCGGATGA CCTGGTCATC
CGCTGCATTC GCGAGCTGCT GCAGCGCAAC CCGCAGCTGC CGCCCGAGCG GGTGGACGAC
GTGGCCATCG CCGCCACCAC CCAGATCGGC GACCAGGGCC TGACCATGGG CCGGGTCGCG
GGGCTGCTCG CGGGCCTGCC CAAGACCGTC CCCGGCTTCT CCATCGACCG CATGTGCGCC
GGTGCGATGA CCGCCGTGAC CACCACCGCC GGCGGCATCG CCTTCGGCGC CTACGACGTG
GTCGTCGCCG GCGGCGTGGA GCACATGGGC CGCCACCCGA TGGGCGAGGG CGTGGACCCC
AACCCGCGCA TCGTCGCCGA GAAGCTGGTC GACCCCTCCG CGCTGGTCAT GGGCTCCACC
GCGGAGAACC TGCACGACCG CTACCCGGAG CTGACCAAGG AGCGCTGCGA CGTCTTCGCC
GCCGCGTCCC AGGAGAAGTA CGCCAAGGCG CTGGCCGCCG GCAAGTTCCA GGACGTCCTG
GTCCCGATGT CCGCCCGGCA CGCCGAGAAG GGCTACGCCC TGGTCACCGC CGACGAGCCG
CCGCGCCCCG GCACCACCGT GGACGACCTC GCCGCCCTCA AGACCCCCTT CCGCGTCCGC
GGCCGGGTCA CCGCGGGCAA CGCCGCCGGC CTGAACGACG GCGCCACCGC GTGCCTGCTG
GCCGCCGAGG ACGTCGCCGA GGAGCTCGGC CTGCCGGTCC GCATGCGCCT GGTCTCCTAC
GCCTACGTCG GCGTCGAGCC CGAGGTCATG GGCATCGGCC CGGTCCCGGC GACCGAGAAG
GCGCTGGCCA AGGCCGGTCT GACCATCGAG GACATCGGCC TGTTCGAGCT GAACGAGGCC
TTCGCGGTGC AGGTCGTGGC CTTCCTGGAG CACTTCGGCA TCGCCGACGA CGACGAGCGC
GTGAACCCCT TCGGCGGCGC CATCGCCATG GGCCACCCGC TGGCCTCCTC CGGCGTGCGG
CTGATGACCC AGCTCGCGCA GCACTTCGAG GAGCACCCCG AGGTTCGCTA CGGCCTGACC
TCGATGTGCG TCGGCATCGG CATGGGCGGC ACCGTCATCT GGGAGAACCC GCACTGGAAC
GGAGAGAGCA AGTGA
 
Protein sequence
MPQTQRAVRQ VVFVDGVRTP FGKAGPKGVY AETRADDLVI RCIRELLQRN PQLPPERVDD 
VAIAATTQIG DQGLTMGRVA GLLAGLPKTV PGFSIDRMCA GAMTAVTTTA GGIAFGAYDV
VVAGGVEHMG RHPMGEGVDP NPRIVAEKLV DPSALVMGST AENLHDRYPE LTKERCDVFA
AASQEKYAKA LAAGKFQDVL VPMSARHAEK GYALVTADEP PRPGTTVDDL AALKTPFRVR
GRVTAGNAAG LNDGATACLL AAEDVAEELG LPVRMRLVSY AYVGVEPEVM GIGPVPATEK
ALAKAGLTIE DIGLFELNEA FAVQVVAFLE HFGIADDDER VNPFGGAIAM GHPLASSGVR
LMTQLAQHFE EHPEVRYGLT SMCVGIGMGG TVIWENPHWN GESK