| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6775 |
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| Symbol | |
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| ID | 8338139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7819555 |
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| End bp | 7821324 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959865 |
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| Product | putative ABC transporter |
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| Protein accession | YP_003117458 |
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| Protein GI | 256395894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.122043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.131288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCA ACACCGAGCA GGGCGCCGCC GTCGACCAGC CGGTCGGCTC CTCCCCGTGG
GCCGTCACCG TGCCGCTGCC GATGGGTGGC GGCGGGTCGC GGGTGCTCAC CGGACGGCTG
GGCAGGCTCG AGACGCTGCT GAAGGAGACC GACGGCCGGC TGTCGGACTT CACCGCCCAG
GAGGCCGACC GCATCCTGCG CCGGGTGCAC GAGCGCATCG CGCTGTCCCC CGACCACGTC
GTCACCGCCA TCGCCGGCGC GACGGGGAGT GGCAAGTCTT CGCTTTTCAA TGCTCTGATT
CGCTTCGAGC TGGCGCCAGT CGGTGCGATC CGGCCCACTA CGACCACCGG CCTGGCGTGC
ATCTGGGACC CAGCGCACGC CGAGGCGTCC ACCGCACTGC TGGACCGGAT CGGCGTTGCC
TCGAATAACA GAATCCTGCG AGGCTCGCTG CTCGACGGCG CGAACCGGAC CGCTGAGCCC
GAACTCGCGC CGCTGGTGCT GATCGACCTG CCCGACCACG ACTCCGCCGT GCGGGCGCAC
CGGGACGAGA CCGACCGGGC GACCGCTGCC GCCGACCTGC TGTTGTTCGT CACCGACCCG
CAGAAGTACG CCGACGCCTC GTGGCACGAG CGCTACCTCC GCCACCTGAA TCACCACCAG
GAGACGCTGG TCGTCGTCCT GAACAAGAGC GACGAACTGA GCGCGGCGGA CATCCGAGCC
TGTGCCGCCG ACCTGAGCAG GATCATGACT GAATCAGGGC TCGGCGACGT GCCGATCCTG
GTGACGTCGA CGCGCACCGG GGAGGGACTT CAGCAACTCA GGGAGCTGAT CGCGTCCAGC
GTTCGCCGCA AGCAGGCCGC TCTCATGCGC AGCGAGGCGG ACGTCGACCG GGCCGCCACC
CTGATCGCCG CCGAACTCGC GCCGCGCGAC GGCAGCGTTC CGGAAAGCCT TTCGCCGCAA
GCGAAATCCG CAACGCTCCT AGCTATAGGC GACAGCACGA GCATGCAGGC CCTGTCAGAC
CTCATCGACG CCACGTACCG GCGCCGAGCC TCGGTCGTCA CCGGCTGGCC CGTCCGGCAT
GCTGTCAGAA CCCTGATATC ACGCCTGCGC GGCGACACCG AGTCCCGCTA CAGCCCTTGG
TCCGGCGCGG TTGCGGGTGA GCCGGCACCG CCGCCGATCC AGTACGGCGA CGTCGAACAC
GCCGTTGCCG ACGCCGTGGA CCGCTTCGCC GAGGCGATGC CGCAGCCGTG GGCCAAGGAG
ATGCGCCGCA TCGGCGATCG CTGCGTGAAG AGCCTGTCCG ACACTCTGGA CACGACGTTG
TCCGGCACGG AGGTTGGGCC GCGGCTCGTT CCTCGCTGGT GGACCGCCGT GCAGGTGGTG
CACTGGATGC TGCTGACGGC TGCGCTAGTG GGAGCCGGCG GGGCGATCGC GTACGCGGCC
TCCGGTGGCG GCAAGGACTC CAGCCTGCCC GATACCGGCC CGATTCCGTT CCCGCTTCTC
GTGGCGATCA TCGCGCTCGT CGGCGGGGCG TTGCTGGATC TCGTGTGCCG TCCGGCGGCA
CGGCGGGCGG CGGGGCGATT GCGGGCGAAA GTGGGCGAAC GGATGACCGA GCGCGTACGC
GGCGCGGCCG AGCAGCTACT GTTCGCTCCG CTCGTCGCCG AACACGAGCG GTATGTCAGG
GCCTGGACGC TGGCTCAGGG ACTTGTCAGG AAAACGAGAG AAAAAGGCGT GCCCCCGTCC
GGCGGGGGAC GGAGGCAGCC TACTAATTAA
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| Protein sequence | MDVNTEQGAA VDQPVGSSPW AVTVPLPMGG GGSRVLTGRL GRLETLLKET DGRLSDFTAQ
EADRILRRVH ERIALSPDHV VTAIAGATGS GKSSLFNALI RFELAPVGAI RPTTTTGLAC
IWDPAHAEAS TALLDRIGVA SNNRILRGSL LDGANRTAEP ELAPLVLIDL PDHDSAVRAH
RDETDRATAA ADLLLFVTDP QKYADASWHE RYLRHLNHHQ ETLVVVLNKS DELSAADIRA
CAADLSRIMT ESGLGDVPIL VTSTRTGEGL QQLRELIASS VRRKQAALMR SEADVDRAAT
LIAAELAPRD GSVPESLSPQ AKSATLLAIG DSTSMQALSD LIDATYRRRA SVVTGWPVRH
AVRTLISRLR GDTESRYSPW SGAVAGEPAP PPIQYGDVEH AVADAVDRFA EAMPQPWAKE
MRRIGDRCVK SLSDTLDTTL SGTEVGPRLV PRWWTAVQVV HWMLLTAALV GAGGAIAYAA
SGGGKDSSLP DTGPIPFPLL VAIIALVGGA LLDLVCRPAA RRAAGRLRAK VGERMTERVR
GAAEQLLFAP LVAEHERYVR AWTLAQGLVR KTREKGVPPS GGGRRQPTN
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