| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6712 |
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| Symbol | |
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| ID | 8338076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7742115 |
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| End bp | 7743281 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959806 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_003117399 |
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| Protein GI | 256395835 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02635] L-rhamnose isomerase, Streptomyces subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.583299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC CGTCGGCTGT GAAGGCCGCT CTGCAGGCGC AGGAGATCGA GACCCCCTCC
TGGGGCTACG CGAACTCCGG CACCCGGTTC AAGGTGTTCG CGCAGGCCGG AGTGCCCCGG
GACCCGTTCG AGAAGCTGGC CGACGCCGCG CAGGTGCACG CCGCGACGGG GGTCGCGCCG
CTGGTGTCGC TCCACATCCC GTGGGACCGT GTCGACGACT ACGGCGCGCT GGCCGCGCAC
GCCGCGAATC TGGGCGTGCG TATAGGGATG ATCAACTCCA ACACCTTCCA GGACGACGAC
TTCAAGCTCG GCTCGGTGGC GCATCCGGAC GCGGCGGTGC GGCGCAAGGC GGTGGCGCAT
CTGATGGAGT GCGTCGACAT CATGGACGCG ACCGGATCGG ACTCGCTGAA GCTGTGGTTC
GCCGACGGCA CGAACTACCC CGGTCAGGAC GACATCGTCG CGCGGCAGGA CCGGCTTTTC
GAGGCGCTGT CAGAGGTCTA CGCGCGCCTT GGCGAGCATC AGCGGATGGT GTTGGAGTAC
AAGCTTTTCG AGCCGGCCTT CTACTCCACC GACGTTCCGG ACTGGGGCAC GTCCTACGCG
CACTGTCTGA AGCTGGGACC GAAGGCGAAG GTGGTCGTGG ACACCGGGCA TCACGCGCCG
GGGACGAACA TCGAGTTCAT CGTCGCGTTC TTGCTGCGGG AGGGGAAGCT CGGGGCGTTC
GACTTCAACT CCCGGTTCTA CGCCGACGAC GATCTGATGG TCGGCGCGGC GGATCCCTTC
CAACTGTTCC GGATTCTGCA CGAGGTGGCG AAGAACGGCG GGTTCGACAA GGCCCACGGC
GTGGCGTTCA TGCTGGACCA GTGCCACAAC ATCGAGGCGA AGATCCCGGC GATGATCCGC
TCGGTGATGA ACGTGCAGGA AGCCACGGCG AAGGTGCTGC TGGTGGATCT GCCGGCGTTG
CGTGAGGCGC AGGCGGCGGG GGACGTGCTC GGTGCGCACG CGGTGCTGAT GGACGCGTAC
GACACCGACG TGCGCCCGCT GCTGGCGGAT CTGCGCGAGG AGATGGGGTT GGACCGCGAT
CCGCTGGCGG CCTACCGCGC TTCCGGCTAC GCGGAGAAGA TCGTCGCCGA TCGAGTGGGC
GGCACACAGG CGGGATGGGG CGCGTGA
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| Protein sequence | MPDPSAVKAA LQAQEIETPS WGYANSGTRF KVFAQAGVPR DPFEKLADAA QVHAATGVAP
LVSLHIPWDR VDDYGALAAH AANLGVRIGM INSNTFQDDD FKLGSVAHPD AAVRRKAVAH
LMECVDIMDA TGSDSLKLWF ADGTNYPGQD DIVARQDRLF EALSEVYARL GEHQRMVLEY
KLFEPAFYST DVPDWGTSYA HCLKLGPKAK VVVDTGHHAP GTNIEFIVAF LLREGKLGAF
DFNSRFYADD DLMVGAADPF QLFRILHEVA KNGGFDKAHG VAFMLDQCHN IEAKIPAMIR
SVMNVQEATA KVLLVDLPAL REAQAAGDVL GAHAVLMDAY DTDVRPLLAD LREEMGLDRD
PLAAYRASGY AEKIVADRVG GTQAGWGA
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