| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6524 |
|---|
| Symbol | |
|---|
| ID | 8337888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7520000 |
|---|
| End bp | 7520440 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644959620 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003117213 |
|---|
| Protein GI | 256395649 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00893581 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0928109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACG AGCAACGGGT TGATCTAGGG GTGTCGTTGT TCATCCCGTA CCGGTACACC
GAGGACCGGC TTTTCCGGGC CCTGCAGGAT GCCGGGTTCG ACGACTGGAC GCTCGCCCAG
TGCCGAGTCT TCCAGCGCGT CGCCCCGAGC GGCTCGCGTC TCAAAGACCT CGCCGACCAG
GCGCAGATGA CCAAGCAAAG CGCCAGCGTG ATGATCGACC AGCTCGAAAA CCTGGGCTAC
GTCCGCCGGC TCCCCGACCC CGCGGACGGT CGTGCCCGGC TGATCGTGAT CGAGGAACGC
GGCCGGCGCG CGATCGAGGT GGTCAGGGCC ACGCTTGACG AGATCTACAC GGAGTGGAAG
ACCTACCTGG GCACCCGCAA CTTCACGTTG CTGCACCAGA TCCTCGATCA ACTCCGTGAG
ATCACCGACC CCTACGCCTG A
|
|---|
| Protein sequence | MDDEQRVDLG VSLFIPYRYT EDRLFRALQD AGFDDWTLAQ CRVFQRVAPS GSRLKDLADQ
AQMTKQSASV MIDQLENLGY VRRLPDPADG RARLIVIEER GRRAIEVVRA TLDEIYTEWK
TYLGTRNFTL LHQILDQLRE ITDPYA
|
|---|
| |