| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6512 |
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| Symbol | |
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| ID | 8337876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7502480 |
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| End bp | 7505068 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959609 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003117202 |
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| Protein GI | 256395638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.302151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCCG CCTGGCTCGA CCTTCCTGTC CGCGGCGCCG TTCCTGAACT CCGGCGTGCC
CTGGACCGGC GCGGGACTGC CGTCCTGGCC GCCCCGCCTG GGACCGGGAA GACCACGTTG
GTGCCGCTGG TCTTGGCCGG TCTGGTGCCG GAGGCCGGGC TCGATGCGGA AACGGGCAGT
CCTCGGCGGG TGCTGGTTGC TGAGCCGCGT CGGCTTGCGG TTCGGGCTGC GGCGCGGCGG
ATGGCCTGGC TGCTGCGTGA ACCGGTGGGT GAGCGGGTCG GCTTCACGGT GCGTGGTGAG
CGCAAGGCCG GGCCGCGCAC TGTGGTCGAG GTGGTCACCA CCGGGGTGTT GCTGCAACGG
TTGCAGCGCG ACCAGGAATT GGCCGGCGTC GAGACTGTCG TATTGGACGA GTGCCATGAA
CGGCACTTGG ACGCCGACAC CGCGCTGGCC TTCCTCCTCG ATGTCCGGGC CACCCTGCGC
CCCGACCTGC AGGTGCTCTG CGCCTCGGCG ACCTCCGACA CCGACGCCTG GGCTCGGCTG
CTGGGCGGGG CGGGCCAGAT CCCTGCGCCC GTCGTGGAAT CCGAGGGGAT CCAGCACCCG
GTGGAGGTGG TCTGGTCGCC GCCTTCCCGG CCGGTGCGTG CGCCGGAAGG GCTGCGCGTA
GATCCCGCGC TGCTGGACCA CGTCGCCGCG ACCGTGCGGC GCGCACTGCG CGAACGCGAA
GGGGACGTGC TGTGCTTCCT GCCCGGCGCG GGTGAGATTG GCCGGGTGGC CGAGATGTTG
GCTGGGCTGC GTGACAGCGT GGACGTGCTG CAGCTGCACG GGCGGGCCGA GTCCGCTGTC
CAGGAGGCGG CGCTGAGCAG TGGCGCCCGT CGGCGGGTGG TGCTGTCCAC CTCCGTCGCC
GAGTCCTCGC TGACCGTGCC GGGGGTACGC AGCGTCGTGG ACTGCGGTCT GGCCAGGGAA
CCGCGCACCG ACCACTCCCG CGGCCTGGCC ACATTGGTCA CCGTCCGGGC GTCGCTGGCG
ACCGGACGTC AGCGCGCCGG GCGCGCCGGA CGTGAGGCCC CCGGAACGGT CTACCGCTGT
TGGGCGCAAT TCGAGGACGC CAGGGCCAGG GCCATGCCGA CCCCCGAGAT CATGCAGGCC
GACCTCACCT CTTTCGCGCT CCAGGCCGCC TGCTGGGGTT CCCCCGGAGC CCGCGGCCTG
GCACTGCTCG ACCTCCCCCC GGACGGCGCG ATGGCCGCCG CCCGCGACGT GCTGACTGCC
CTGGGCGCCG TCGACGCCGA GGGCCGCGTC ACCAAGCGGG GCGTGAGCAT CAACCGCACC
GGCCTGCACC CGCGGCTCGG CCGAGCCCTG CTGGACGGTG CCGCGCTGGT CGGCGCCCGC
CAGGCGGCCG AACTGGTGGC GCTGTTGTCC GAGGAACCCC CGCGCGCGCT GGGCGACGAC
CTGGCCGCCG TCCACCGCGC TGCCGCGGCC GGCCACAGCA TCTATGCCGC CCACTGGCGC
GACGAGGTCC GCCGGCTGCT GGGCCACATC GAGTCCGCCG GCAACGACCG GTCGGCGGTC
AGCCGTGCCG CGGCGGGCGG TCTGGTCGTC GGGCTCGCCT TCCCTGAACG CATCGCGCGG
GCCCGCGCGA GTACGGGTTC GGCGAAGCCC GAACCAGGCG CACGCGCCTC CTACTTGATG
GCCTCGGGCA CCGCCGCCGA CACAGCGCCC GGCTCCGCCC TGTCCGGCGC GGAGTGGATC
GCCGTCGCAA TCGCCGACCG GCCGGCCGGA TCGCCCGCCG CCAGGGTCCA GCTGGCCGCC
GTACTGGACG AGGCCACCGC CCGGCGTTGC GCGCCGCCCC TGTTCACCGA CCGTGAGGAA
GTCCGCTGGG CCGTTCCCGC CGGGTCGCGC CGAGGCGAGG TCGCGGCCAG AAGGGTCCAA
TCCCTGGGCG CGATCGAACT CACCACCAAA CCCCTCGCCG CCCCCGCTCC CGCCCTCCTG
CGCGCCGCCC TGCTGGAAGG TCTGGCCACT GAGACCGTCA GCGAACTGCT TACCTGGCCG
GCCGAGGCCA CCGCCCTACG CCAACGCTTG GCTTTCCTGC ACCGCGTTCT CGGCCAGCCC
TGGCCCCAGG TCGACGACCA GGCCCTGCTG GCCCGAGCAG ACCAGTGGCT GGAGCCCGAA
CTTTCCCGCG CCCGCCGCCG CGCCGACCTC GAACGCATCC CCACGACAAC CGCTCTGACC
CGACTGCTGC CCTGGACCGG CGGCGCCGCC GGGCGTCTGG ACGAACTCGC CCCCGAACGC
ATCACTGTCC CCAGCGGCAG CCGAATCCGC GTCGACTACT CCGCCGACCG CCCCGTCCTC
GCCGTCAAAA TCCAAGAGCT TTTCGGCTGG GACGCAGCCC CACAACTGGC CGACGGCCGA
GTCACCCTGA CGATCCACCT GCTTTCTCCC GCAGGGCGCC CCGCCGCAAT CACCAGCGAC
CTCGCCTCCT TCTGGCGCGA CGGCTACCGC GCCGTTCGCG CCGACCTACG CGGCCGCTAT
CCCCGCCACC CCTGGCCCGA GGACCCCACC GCTGCCCAAC CCACCCGGCG TCTCAACCAT
CGCAAATAG
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| Protein sequence | MNPAWLDLPV RGAVPELRRA LDRRGTAVLA APPGTGKTTL VPLVLAGLVP EAGLDAETGS
PRRVLVAEPR RLAVRAAARR MAWLLREPVG ERVGFTVRGE RKAGPRTVVE VVTTGVLLQR
LQRDQELAGV ETVVLDECHE RHLDADTALA FLLDVRATLR PDLQVLCASA TSDTDAWARL
LGGAGQIPAP VVESEGIQHP VEVVWSPPSR PVRAPEGLRV DPALLDHVAA TVRRALRERE
GDVLCFLPGA GEIGRVAEML AGLRDSVDVL QLHGRAESAV QEAALSSGAR RRVVLSTSVA
ESSLTVPGVR SVVDCGLARE PRTDHSRGLA TLVTVRASLA TGRQRAGRAG REAPGTVYRC
WAQFEDARAR AMPTPEIMQA DLTSFALQAA CWGSPGARGL ALLDLPPDGA MAAARDVLTA
LGAVDAEGRV TKRGVSINRT GLHPRLGRAL LDGAALVGAR QAAELVALLS EEPPRALGDD
LAAVHRAAAA GHSIYAAHWR DEVRRLLGHI ESAGNDRSAV SRAAAGGLVV GLAFPERIAR
ARASTGSAKP EPGARASYLM ASGTAADTAP GSALSGAEWI AVAIADRPAG SPAARVQLAA
VLDEATARRC APPLFTDREE VRWAVPAGSR RGEVAARRVQ SLGAIELTTK PLAAPAPALL
RAALLEGLAT ETVSELLTWP AEATALRQRL AFLHRVLGQP WPQVDDQALL ARADQWLEPE
LSRARRRADL ERIPTTTALT RLLPWTGGAA GRLDELAPER ITVPSGSRIR VDYSADRPVL
AVKIQELFGW DAAPQLADGR VTLTIHLLSP AGRPAAITSD LASFWRDGYR AVRADLRGRY
PRHPWPEDPT AAQPTRRLNH RK
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