Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6363 |
Symbol | |
ID | 8337726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7319162 |
End bp | 7319830 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959464 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003117058 |
Protein GI | 256395494 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.318357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGTG TGAGTCCTCG CCCCGCACAA CCCGATATCC GCCGCGCACT CATCGAAGCG GCGGCGACGA TCCTCGCCGA ATCCGGGCCC GACGGACTGT CCACCCGGCA GCTGGCCCGA GAGGTCGGAG TTTCCACTAC TGCTGTCTAC ACCTATTTCG GCGGCATGGA CGACTTGGTA CGCGCGATGG TGCACGAGGG CTTCGCCCGC CTGAACCGCG CCCTGACCGC CACCGGCGAC TCGCAGGACC CGGTCGCCGA CGTGGTGCGC CTCGGACGTG TCTATCGCGA GAACGCGCTG CGGCACAGAC ATCTGTACGC CGTGATGTTC GGCGGGTCGG CCCTGGCCGG GTTCTCCCTG ACCGACGAGG ATCGCGCGCA CGGGCTGTAC ACCCTCGATC TCCTGGTCGC CGCGATCGAG CGATGCGTGG TGGCCGGCCG GTTCCGCAGC GGGGACGCGA CGCTGGTCGC GCACGAGTTG TGGATGTCGA TCCACGGCAT CGTCACGCTG GAGATCGGCG GGTACCTGTT CGAGCCCTAC GACGCCGACG CGTGCTTCGA CGCCCAGGTG TGCACCTTGC TGGTGGGCTC CGGCGACGGG CTGGAGCGCG CGCGGCAGTC CATCGCGATG TCCGGCGCGG AAGCCGCGGC CAAGGAGCCC GCGGCCTAG
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Protein sequence | MDGVSPRPAQ PDIRRALIEA AATILAESGP DGLSTRQLAR EVGVSTTAVY TYFGGMDDLV RAMVHEGFAR LNRALTATGD SQDPVADVVR LGRVYRENAL RHRHLYAVMF GGSALAGFSL TDEDRAHGLY TLDLLVAAIE RCVVAGRFRS GDATLVAHEL WMSIHGIVTL EIGGYLFEPY DADACFDAQV CTLLVGSGDG LERARQSIAM SGAEAAAKEP AA
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