Gene Caci_6217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6217 
Symbol 
ID8337580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7157839 
End bp7158321 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content71% 
IMG OID644959318 
Productcupin 2, barrel 
Protein accessionYP_003116912 
Protein GI256395348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.356922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGG ACACTCCTAG CATCGCGCCC CGGGTCATGC TTCGGGTCAT GTCTACAGCC 
CGCCGCCGCG TCGCCCTCGC CGGCGCGGTC GCCGCCACCG CCGCGCTCGC GCCGGGTGTC
GCGAGCGCCA CCGCGCCGTC GGGGGTGTCG GTGACCGAGA CCAGCCGGAC CAGCCTGCTC
GGCGTGGACC ACGTCCTGCG CCAGGTGACG ATCCAGCCCG GCGGCAGCAC GGGGTGGCAG
TGGCACGCCG GGACGCTGTC GGTGTACGTC GAGAAGGGCT CGGTCACGCA CAACGAGTCG
GACTGCTTCT CGACCCAGGT CTACAGCGAC AACTCCTCGT TCCTCGAGCC GGACGGCGCC
GACAACGTGC AGATCGACCG GAACCTGGGG ACGACGCCGC TGGTGTTGGA CATCCTGTAC
GTCTCTCCGG CCGGCAGCCC GCTGGACCAG GACGCCCCGA ATCCCGGGTG CGCCTTCCAG
TAG
 
Protein sequence
MPLDTPSIAP RVMLRVMSTA RRRVALAGAV AATAALAPGV ASATAPSGVS VTETSRTSLL 
GVDHVLRQVT IQPGGSTGWQ WHAGTLSVYV EKGSVTHNES DCFSTQVYSD NSSFLEPDGA
DNVQIDRNLG TTPLVLDILY VSPAGSPLDQ DAPNPGCAFQ