| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5946 |
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| Symbol | |
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| ID | 8337308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6864351 |
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| End bp | 6865619 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959050 |
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| Product | ROK family protein |
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| Protein accession | YP_003116645 |
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| Protein GI | 256395081 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.908629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGGCCC GCAAGGGGTT CACTTACGGA GTGACCCAGG AGGAACTGCG CCGGCACAAC
CTGTCGACCC TCTTGCGCTA TGTCCACCAG CACGGACCGA CCTCGCGCGC CGTGCTCACC
GCGAGCATGA ACCTCAACCG CTCGACGATC GGCGCGCTGA CCGCCGACCT GTCCTCGGCC
GGGTTGGTCG AGGAAGAGCT GCCCGGCCAG CACCTCGGTG CCGGCCGGCC GTCCCTGGTC
GTGGTGCCCA GGGCCGCGCA CGTGTACGCG CTGGCCTACA TGATCGGCGT CGACTTCGTC
GTCGCGGCCC GGGTGGGCCT GGGCGGACAG GTGCTCGACC GGCGCGAGCT GTACCGCCCG
CGCGGCGACT ACGACCTCGA AGACGTCATG GGGCACCTGG AGCGCTTCAC CGGCGAGCTG
CTGTCCTCCG AGGACATCCC GCCCGGCGCC TTCTGCGCCG GGGTGGGCGC GGCGGTCCCG
GCCGCCGTCC GCAACTCCGA CGGCATGCTG CGTTTCGTCC CCAACATGAA CTGGGACGAC
TGGGGCGACG CCCCGCTCGG CGACATCCTG CACCGCCGCC TGGTGGAGAC CTTCGGCATC
CAGGCCCCGG TCGCGGTCGG CAACGACGCG GACCTCGGCG CCCTGGCCGA ACGCACCCGG
GGCGTGGCAG TGGGCTGCGA CGACCTGGTG TACATCGTCG GCGAGGTCGG CGTCGGCGCC
GGGGTGATCG CCGGCGGCGA GGCCATGTCC GGACACGACG GCTACGCCGG CGAGGTCGGG
CACATGGTGG TCAACCCCTC CGGCCGGCTG TGCCGCTGCG GCGCGCGCGG CTGCTGGGAG
ACCGAAATCG GCGAGCCGGC GATCCTGGCC GCGGCCGGCC ATGCCGACGG ACGCCGCGCG
ACCGTGGCCG AACTCGTCGC CGAGGCGGCG GCCGGCGATG AGAAGTCGGT CCGCGCGCTG
GAGCACATCG GCGGCTGGAT CGCCCTGGGC GTGGCGAACA TCGTCACGGT CTTCAACCCC
AGCATGGTGA TCTTCGGCGG CCTGTTCGGC GACGTGTTCC CCGGCATCCA GGGGCAGATC
CGCACCAACC TGCTCTCCGG GAGCCTCGGC GTGGTCCGCG AGGGCGTGCG CCTGGTGACG
CCGGGACTCG GCGCGGACTC CACGCTGATC GGCGCCGCGG AGAAGGCGTT CGAGCCGTTG
CTGGCCGACC CGCTGGGGTT CGTCTCGGCG ATGGCCGCCA TGCCGGCACC CTCATCGCGC
GTTCCCTGA
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| Protein sequence | MRARKGFTYG VTQEELRRHN LSTLLRYVHQ HGPTSRAVLT ASMNLNRSTI GALTADLSSA
GLVEEELPGQ HLGAGRPSLV VVPRAAHVYA LAYMIGVDFV VAARVGLGGQ VLDRRELYRP
RGDYDLEDVM GHLERFTGEL LSSEDIPPGA FCAGVGAAVP AAVRNSDGML RFVPNMNWDD
WGDAPLGDIL HRRLVETFGI QAPVAVGNDA DLGALAERTR GVAVGCDDLV YIVGEVGVGA
GVIAGGEAMS GHDGYAGEVG HMVVNPSGRL CRCGARGCWE TEIGEPAILA AAGHADGRRA
TVAELVAEAA AGDEKSVRAL EHIGGWIALG VANIVTVFNP SMVIFGGLFG DVFPGIQGQI
RTNLLSGSLG VVREGVRLVT PGLGADSTLI GAAEKAFEPL LADPLGFVSA MAAMPAPSSR
VP
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