| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5853 |
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| Symbol | |
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| ID | 8337214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6758257 |
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| End bp | 6760485 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958957 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003116552 |
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| Protein GI | 256394988 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0389202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.176008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC GCCGCAGACT TACGCTGGTC GGCACGGCCG TGAGCCTGGC CGCGGCCACC
GCGGTGACCG CCGCCGCGGC TCCCAGCTCG GCCGCCCCGG CCCGGTCGGC CGCCGCACTG
AACGCCGCCG CGCTGAGCTC CACGCCGGTC AGCACCGGCG ACATGACCAA CGACGTGATC
TACCAGCTGC TCACGGACCG CTTCTACGAC GGCAACACCG GCAACGACAA TCCCTCCTCC
TCGCCGAACC TGAACGACTC CAGCCACAAC AACTGGCAGG AGTACTGGGG CGGGGACTTC
GCCGGCGTGA GCGCCAAGAT GCAGTACCTG TCCGACCTCG GCGTCGGCGC GATCTGGATC
TCCCCGCCGG TGGAGAACGT CAACGTCCCG GTCCCGGACA GCACGACCGG TGCTACCACC
GCGGGCTATC ACGGTTACTG GGGAATGGAT TTCTACACCC CCGAGCCGCA CTTCGGGCAG
TGGGCGGACT TCGACGCCAT GGTGGCCGCG GCGCATGCCA AGGGCATCAA GGTGATCATG
GACTGGGCGG TCAACGACTC CAACCCCGAG GACACCAGCA ACCCGAACTA CGGCGCGGGC
GGCGCGCTGA AGCAGAACGG GACCACGCTG TCGACGTACG ACAACGACCC GAACGGCTAC
TTCCACCACA ACGGCGGCGT CGGGGACTAC AGCAACCTCT ACGACGTCGA GTATCAGAAC
CTGTTCAACC TCGCCGACCT GGCGCAGGAG AACCCGGCGG TCACCAACTA CGTGCAGGGC
GCCGTCGACA CCTGGCTCTC CCACGGCGTG GACGGCATCC GCATGGACGC CGTCAAGCAC
ATGCCCGGCG GCTGGCTCAA GGGCTACGTC GACCACATCG AGAACTCGCA CAGCGTGTTC
ATGTACGGGG AGTGGGCCGA CCCGAGCAGC GCCCCGCTGT GGTCGGACGA GGTGAAGTTC
GCCAACACCG ATGGGCAGTC GCTGGAGAAC TTCGACCTGA ACACGGCGGT GCGTGACGTC
TTCGCCAGCA ACGCGAACAT GTCGGAGCTG GACTCCGAAC TGAGCCGCCA ACAGAGTTCC
ATCAACTGGT CCAACGACCT GGTGGACTTC GTCGACAGTC AGGACGAGAA CCGCTTCCTG
TCCATCAATA ACAACACCAC GCTGCTCGAT CAGGCGACCG TGGTGAACAT GACCGTGCCG
GGCATCCCAT CGGTCTACTA CGGCGATGAG CAGTACCTGC ACAACGACAC CACGAACTCC
TTCGGCCAGG TCGGCGGCGA TCCCTACAAC CGGGCGCAGA TGACGTCCTT CGCCGAGACC
AGCCGCAACT TCGCCGTCAC CCAGAAGCTG GCCGCCCTGC GCAAGGCCAA CCCCGCCCTG
CGTTACGGCA GCTCGACTCA GCGCTGGCTC AACAACGACG TCTACGTCTA CGAGCGCAAG
TTCTACAACA ACACGGTCCT GGTCGCGGTG AACAAGAGCA AGACCGCGAA CTACGCCCTG
ACCGGCCTGA ACACCTCCCT GCCCGCCGGC AGCTACAACG ACGTCCTCAG CGGCGCCCTC
GGCGGCGGCA CCCTGACCGT CAGCACCGGC ACCGGCGGCA ACAACCCCAC CGGCGCCTAC
ACCCTGAACG CAGGCCAGGC AGCCGTATGG TCCTATGCCG CCCCGACCGC CTCCACCCCC
GAGGTCGGCA ACATCGGCCC GACCATCGGC CACAGCGGCG ACGTCGTAGC CGTCACCGGC
ACCAACTTCG GCACCACCGC CGGCACCGCC ACGGTCGGCG GCACAGCCGC ACCAGTGAAG
TACTGGTCGA ACACCGAGGT GGACCTGGCA ATCCCCGCCG GCGCCACCGC AGGCCTGGAC
CAGGTAGTGC TCACCTCCTC CGCAGGCACC GCCAGCAACG GCATCGCCTA CCACGTCGAG
TCCGGAACGC AGGTCCCCGT GACCTTCACC GTGACCGGCA CATCCACCTC ACCAGGCGAC
GAGATCTACC TGTCCGGCAA CGACGACGAA CTCGGCAACT GGAGCACCGA CACCGCCACC
GCCATCGGCC CACTCCTCGA CCCCAACTAC CCGACCTGGT TCAGCCTGGC CAGCGTCCCA
GCCGGAGCCA CCGTCCAATT CAAGTTCTTC ATCAAGCACA CGGACGGCAC AGTCACCTGG
GAAGGCGGAT CGAATCACAC GTACACCGTC CCGGCTTCCG GGACGGGGAC TGTGACCGTC
GCCTGGTAG
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| Protein sequence | MQRRRRLTLV GTAVSLAAAT AVTAAAAPSS AAPARSAAAL NAAALSSTPV STGDMTNDVI
YQLLTDRFYD GNTGNDNPSS SPNLNDSSHN NWQEYWGGDF AGVSAKMQYL SDLGVGAIWI
SPPVENVNVP VPDSTTGATT AGYHGYWGMD FYTPEPHFGQ WADFDAMVAA AHAKGIKVIM
DWAVNDSNPE DTSNPNYGAG GALKQNGTTL STYDNDPNGY FHHNGGVGDY SNLYDVEYQN
LFNLADLAQE NPAVTNYVQG AVDTWLSHGV DGIRMDAVKH MPGGWLKGYV DHIENSHSVF
MYGEWADPSS APLWSDEVKF ANTDGQSLEN FDLNTAVRDV FASNANMSEL DSELSRQQSS
INWSNDLVDF VDSQDENRFL SINNNTTLLD QATVVNMTVP GIPSVYYGDE QYLHNDTTNS
FGQVGGDPYN RAQMTSFAET SRNFAVTQKL AALRKANPAL RYGSSTQRWL NNDVYVYERK
FYNNTVLVAV NKSKTANYAL TGLNTSLPAG SYNDVLSGAL GGGTLTVSTG TGGNNPTGAY
TLNAGQAAVW SYAAPTASTP EVGNIGPTIG HSGDVVAVTG TNFGTTAGTA TVGGTAAPVK
YWSNTEVDLA IPAGATAGLD QVVLTSSAGT ASNGIAYHVE SGTQVPVTFT VTGTSTSPGD
EIYLSGNDDE LGNWSTDTAT AIGPLLDPNY PTWFSLASVP AGATVQFKFF IKHTDGTVTW
EGGSNHTYTV PASGTGTVTV AW
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