Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5821 |
Symbol | |
ID | 8337182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6724970 |
End bp | 6726028 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958925 |
Product | DNA polymerase LigD, polymerase domain protein |
Protein accession | YP_003116520 |
Protein GI | 256394956 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.305654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGG AGACCATCCT GGCCGTCGAC GGCACCGAGG TCGCGGTGTC GCATCCGGAG AAGGTGTATT TCAGCAAGCG CGGCGAGACC AAGATGGATC TGGTCGAGTA CTACCTCGCG GTCTCCGGGC CGATCATGAA CACGCTGAAG GACCGGCCGC TGCTGATGGA GCGGTATCCG AACGGCGCGG GCGGCAAGTC GTGGTTTCAG AAGCGCGTGC CGAAGACGAC GCCGCCGTGG CTGAAGACCA TGGAGGTGTC CACGCCGAAC GGGACGACCA GCGACGCGTT GGTCGCGGCG GACATGGCGC ACATCGTGTG GGGCGTGAAC CTGGGCTGCT TGGGTTTTCA CGTCTGGCCG ATCCGCGCTT CCGATCCGGA TATCACCGAC GAGCTGCGTA TCGATCTGGA TCCCTCGCCG GGCGTCGGGT ATCCGGAGGT GCGGCAGGCC GCCGTGCTGA CGCGGGAGTT GTTGGCCGAG CTGGGCATCG AGGCGTTCGT GAAGACCTCG GGCTCGCGCG GGCTGCACAT CTACGTCAGC CTTCAGCATC GCTGGGACGG CTACGAGGTG CGCGCGGCGG CGGTCGCGCT GGCGCGGGAG ATGGAGCGGC GGTATCCGGA GCAGATCACG GCACAGTGGT GGAAGGAGGA GCGGGGTGCG CGGGTGTTCG TGGACTTCAA CCAGAACGCG CCACACAAGA CGGTGTTCGG TGCGTGGTGC GTGCGGCCGC GCGTCGGTGC GCAGGTGTCG ACGCCGATCT TCTGGGACGA ACTGATGACG ATCGTGCCCG ACGAGCTGAC CATCGCCACG GTCCCGGCCC GGGTCGCCGA GCGCGGCGAT CCGTGGGCGG AGTACAACGC GCGGCCGCAG TCGCTGGAGC TGCTGCTGGC GATGTCGGAG CGGGACATGG CGAACGGCTT GATGGACGCG CCCTGGCCGC CGGTGTATCC CAAGCAGCCG AACGAGCCGC CGCGGGTGGC GCCTAGTCGG GCTCGGCATG ATGCTGATGC TGATGCCGCC GACTCTGCTG GCTCGGCTGA CTCAGCCGAG GCTTCATAA
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Protein sequence | MSGETILAVD GTEVAVSHPE KVYFSKRGET KMDLVEYYLA VSGPIMNTLK DRPLLMERYP NGAGGKSWFQ KRVPKTTPPW LKTMEVSTPN GTTSDALVAA DMAHIVWGVN LGCLGFHVWP IRASDPDITD ELRIDLDPSP GVGYPEVRQA AVLTRELLAE LGIEAFVKTS GSRGLHIYVS LQHRWDGYEV RAAAVALARE MERRYPEQIT AQWWKEERGA RVFVDFNQNA PHKTVFGAWC VRPRVGAQVS TPIFWDELMT IVPDELTIAT VPARVAERGD PWAEYNARPQ SLELLLAMSE RDMANGLMDA PWPPVYPKQP NEPPRVAPSR ARHDADADAA DSAGSADSAE AS
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