| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5764 |
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| Symbol | |
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| ID | 8337125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6662039 |
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| End bp | 6663946 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958868 |
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| Product | Periplasmic component of the Tol biopolymer transport system-like protein |
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| Protein accession | YP_003116463 |
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| Protein GI | 256394899 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0700956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.065042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGC ACACGAGGGC TCTGGCCTTC ACAGCGACAT CGGCGTTGCT CATCGCCGCC
GCGGAGGGCG GGGCTCCGGC CCGCGCGGCC GACATCGCGT CCGGTTCCAT CATCTTCACG
CAGACGGTCC CCGGGACGGC CGTGGGCCTG GTCATCACCA ATCCGGACGG CTCCGGCACC
CATCTCCTAC ATCCGTCCGG AAACGGGCTG TCCGCGACAT CGCAGATCTT CGAGCCGGCG
GTCTCCCCGG ACGGCAGCCG CGTCGCCTTC GGCGACGTCG CCAGCCGGGC GGTCTGGGTG
GCCGGCGTCG ACGGTTCGCG CCCGGTCCGC ATCAGCAGCC CGACCGGCTC CGCGGTCGAC
AGCGAGCCGA CATGGTCGCC CGACGGCACG TCGGTCTTCT TCACCCGGCG CGCGGGCACC
GCGCAGATCA TGAAGGCCTC GGCCGACGGC GACCACGACG AGGCCGCGGT GTTCTTCCCG
ACCGGGACCA ACGACACCGA GCCGAGCGTC GCCGTCAACG GCGACCTGGC CTTCGAACGG
AACGTCAACG GAACGAGCAC CATCTTCGTC CTGGCGGCCG GCGCCGGCAG CGCGACGCCG
TTCGCGAACG GCGCCCGGCC CGCGTGGTCG CCGGACGGCT CGCGGCTCGC GTACGACCGG
GGATCGGCGC TCCTGGTGAA GACCAGGGCC GGCCAGGAGA GCCTGATCGG TACCAGCGGC
GTGCAGGCGT CTCGCCCGGC CTGGGCCGCC GACGGAGCCC ACATCGCCTT CGAGGGCAGC
GTGCCGGGCC ACCACCGGCA GATCTGGGTC GTCGACACCA GCACCCTGAC CGTGTCCCCG
GTCGGCGCCG AGCCTCCGGA CGGCGTCGTG GAGAACGCCC CGGCCTGGCA GACGATCCGC
AAGACCACGG TCGACCGGGT CGGCGGGGCG GATCGCATCG ACACGGCCGT GGCCGCCTCG
CACTTAGGCT ACGACACCCC GAACGCGAAC GGCACCGGCA CGAACGGAGG ACGCGTCGCC
AACGCGGTCG TGCTCTCCCG CTCCGACACC TTCGCCGACG CCCTCGCCGG CTCGGCGCTG
GCCGGCAGCC TCAACGGGCC GCTGCTGCTG ACGCCGACCG CGAGCCTGGA CGCGCGGACC
GCCGCGGAGA TCACCCGCTG CCTGCGCCCC GGCGGCACGG TCTTCCTGCT CGGCGACTCC
GGCGCGCTGT CGTCGAAGGT GCAGGCGCAG GTCCTCGCCC TCGGATTCCA GGTACGGCGG
CTCGCCGGGC CGGACCGGTA CGCCACCGCC GCCGCGATCG CCGCCGCGAT CACCCCGAAC
CCCGTCACGA TCCTGGTCGC CACCGGCGCC AACTTCCCCG ACGCCCTCGC CGCCGGCGCC
GGCGCCGCGG GCGTGCCCGG TACGGTCGTC GTGCTGTCCG CCGACCGGGT GCTGCCGGGA
TCCACCGCCG CGTACCTCGC CGCCCACGCC GGCCCGACCA CGCGGCTGAT CGGGGTCGGG
GACCAGGGCG TCGCGGCCCT GCGGACCGCG TTCCCGGCCG GCCGCGTCCA ATCCGCCGCC
GGCGCCGACC GGTTCGCCAC CGCCGCCGCC GTCGCGCAGA CCTTCTTCAC CGGCGTCAAA
GCACCCCGCG TCGTCGGCCT GGCCACCGGC TTCAACTGGC CCGACGCCCT GGCCGGCGGC
GCCCTGCTCG GCGCCAACAA CGGACCGCTG CTGCTGGCGG ACAAGACGGG CATCCCGGCG
TCGGAGGCGG ATTATCTGCG GACCGAGGCC GGAGCCATCA GCGAGGTGAT CGTGAACGGC
GATACCGGAG TCGTGTCCGG CAACGCCGCG GCGAGCGTGG CCAACGTCGT CGGCGTCTTC
GGGCAGGCGA ACTTCTTCGA CAACCGGCGC GCGCCGGTGC TGCCGTAG
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| Protein sequence | MNRHTRALAF TATSALLIAA AEGGAPARAA DIASGSIIFT QTVPGTAVGL VITNPDGSGT
HLLHPSGNGL SATSQIFEPA VSPDGSRVAF GDVASRAVWV AGVDGSRPVR ISSPTGSAVD
SEPTWSPDGT SVFFTRRAGT AQIMKASADG DHDEAAVFFP TGTNDTEPSV AVNGDLAFER
NVNGTSTIFV LAAGAGSATP FANGARPAWS PDGSRLAYDR GSALLVKTRA GQESLIGTSG
VQASRPAWAA DGAHIAFEGS VPGHHRQIWV VDTSTLTVSP VGAEPPDGVV ENAPAWQTIR
KTTVDRVGGA DRIDTAVAAS HLGYDTPNAN GTGTNGGRVA NAVVLSRSDT FADALAGSAL
AGSLNGPLLL TPTASLDART AAEITRCLRP GGTVFLLGDS GALSSKVQAQ VLALGFQVRR
LAGPDRYATA AAIAAAITPN PVTILVATGA NFPDALAAGA GAAGVPGTVV VLSADRVLPG
STAAYLAAHA GPTTRLIGVG DQGVAALRTA FPAGRVQSAA GADRFATAAA VAQTFFTGVK
APRVVGLATG FNWPDALAGG ALLGANNGPL LLADKTGIPA SEADYLRTEA GAISEVIVNG
DTGVVSGNAA ASVANVVGVF GQANFFDNRR APVLP
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