Gene Caci_5753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5753 
Symbol 
ID8337114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6649997 
End bp6650977 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID644958857 
ProductPfkB domain protein 
Protein accessionYP_003116452 
Protein GI256394888 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.231801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0725817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACCG TGATCGGCGA AGCCCTCATC GACCTCGTCC CGGCCGGCGA GCCCGGCGGC 
TACCGGGCCC GGCCCGGCGG CAGCCCGCTC AACGTCGCGA TCGGCCTGGC GCGTCTGGGC
CATCGCACGG CACTGATGGC CCGTTTGGCG GACAACGCCT TCGGCCGCCT GCTGCGCGAA
CACGCCGCGT CGGAAGGCAT CGACCTCACC TGCGCGCCGT GGGCGACCGA GCCCACCACC
CTGGCGATCG TCTCCCTGGA CAGCGACGCC CAAGCCAGCT ACGACTTCTA CCTGGACGGC
ACCGCCGACT GGCAGTGGAC TGACGCGCAG ACCGCCGCCC TCCCCGAGGA CACCACGATC
TTGCACCACG GCTCGCTGGC GTCCTGGACT CCGCCGGGCG ACGAACGCAT CCACGCGTTG
GCGTCCGAGC TGCACCGGCA TGGCAGTGTG CTGATCAGCT ACGACCCGAA CATCCGCCCC
GCCCTCCTCG GCAAGCCGTC CCACGCTCGT CCGCTGATCG AGCGGAACGT CGGCGTCTCC
CACATCGTCA AGGCCAGCCG CGACGACATC GACTGGCTCT ACCCCGGACA CGGACCGGAG
CACGTCGGCG CAGCCTGGAT CGACCTCGGC GCGCAGCTGG TCATCGTCAC CGACGGACCT
CGCGGCGCGC ACGTGTTCCG CTCCGCCGCC GCGCCGGCGC ATCGCCCGGG ACGCGCCGTG
CAAGTCGCGG ACACCGTCGG AGCCGGCGAC GCGTTCACCG CGGGATTGCT CGGCGCGCTG
GTGAGAAACG GCGTACAGAC TCCCGATCAG CTCCGCCAGG CAACGCCTCA GCTTCTGGAC
AACGCCGTCG ACGACGCCAT CCTGGTCTCC GCACTCACCT GCGAACGCGT CGGCGCCGAT
CCGCCGATGG CGCTGCCGCG GCCGCACACG CCACCGAGCA CACCGCTGTC AGCGGCGGAT
CTGGGATTCA GGGACGTGTA G
 
Protein sequence
MLTVIGEALI DLVPAGEPGG YRARPGGSPL NVAIGLARLG HRTALMARLA DNAFGRLLRE 
HAASEGIDLT CAPWATEPTT LAIVSLDSDA QASYDFYLDG TADWQWTDAQ TAALPEDTTI
LHHGSLASWT PPGDERIHAL ASELHRHGSV LISYDPNIRP ALLGKPSHAR PLIERNVGVS
HIVKASRDDI DWLYPGHGPE HVGAAWIDLG AQLVIVTDGP RGAHVFRSAA APAHRPGRAV
QVADTVGAGD AFTAGLLGAL VRNGVQTPDQ LRQATPQLLD NAVDDAILVS ALTCERVGAD
PPMALPRPHT PPSTPLSAAD LGFRDV