Gene Caci_5687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5687 
Symbol 
ID8337047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6562057 
End bp6562689 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID644958790 
Productresponse regulator receiver and ANTAR domain protein 
Protein accessionYP_003116386 
Protein GI256394822 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AGTCCACCCC CGCCCGCCGA GTGATCATCG CCGAGGACGA GGCGCTGATC 
CGCCTGGACC TGAAGGAGAT GCTCCAGGAA GAGGGGTACG AGGTCGTCGC CGAGGCCTCC
GACGGGGCGG CCGCCGTGCG CCTGGCCGAG GAGTACCGGC CGGACCTGTG CATCTTCGAT
GTGAAGATGC CGGTGCTGGA CGGGATCACC GCCGCCGAGC AGGTGATCGA GGCGCGGATC
GCGCCGGTGC TGATCCTCAC CGCCTTCTCC CAGCGCGAGC TGGTCGAGCG GGCGGCCGAG
GCCGGCGTGA TGAACTACCT GGTCAAGCCG TTCACCAAGG ACAAGCTGGT GCCCGCGATC
GAGATCGCGG TGTCCCGGCA CACCCAGCTG ACCGCGCTGG AGGGCGAGGT CGCCGACCTC
GGCTCGCGGC TGGAGACGCG CAAGCTGGTG GACCGGGCCA AGGGCATCCT GCAGACCGCG
CACGGCATGA CCGAGCCCGA GGCCTTCCGC TGGATCCAGA AGACCTCGAT GGACCGCCGG
ATGACGATGA AGGAAGTGGC CGAGGTGGTC ATCTCCGGCT CCACCGCCGT CGGCTCGCCG
GCTGCCGGGG CGAGCCCGGC CAAGGCGGAG TGA
 
Protein sequence
MTTESTPARR VIIAEDEALI RLDLKEMLQE EGYEVVAEAS DGAAAVRLAE EYRPDLCIFD 
VKMPVLDGIT AAEQVIEARI APVLILTAFS QRELVERAAE AGVMNYLVKP FTKDKLVPAI
EIAVSRHTQL TALEGEVADL GSRLETRKLV DRAKGILQTA HGMTEPEAFR WIQKTSMDRR
MTMKEVAEVV ISGSTAVGSP AAGASPAKAE