| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5633 |
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| Symbol | |
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| ID | 8336993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6494017 |
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| End bp | 6495717 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958737 |
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| Product | ABC transporter membrane-spanning protein |
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| Protein accession | YP_003116333 |
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| Protein GI | 256394769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3559] Putative exporter of polyketide antibiotics |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00963141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGTGCCG AGACGGCGTC GGAGCCGAAG AAGAGCGACA AGAAGGCCTC CACCAAGACC
TCCAAGTTCG CCACCGAACC CGGCGCGCAG GCCGACTCCG ACAGCGGTCT TCGTACCCTG
ATCAAGCTCG CCTCGCACCG CGACCGCATC ATGCTGCCGG TGTGGATCTA CGCGCTGCTG
GCGACCGTCG GCGGGACCGC GTACTCGTTG AAGAAGCTGT ATCCGGCGCA GAGCGACCGC
GACAAGCTCG GCGCCAGCAT CGGCACGAAC CCCTCGCTGC GCGCGCTGTA CGGCCCGCTC
TACGACACCC ACAGCCTCGG CGCCCTGACC GCCTGGCGCA CGCTGGGTTT CGGCGGCCTG
CTGATCGGCA TCATGGTGGT CCTGCTGATC ACCCGGCACA CTCGCGCCGA GGAGGAGTCC
GGGCGGCTAG AGCTGCTCGG GTCCGGCGCG GTGGGACGTA ACGCGCCGTT GAGCGCGGCG
CTTTCCATCG CTGTCGGCGT CTGCTTCGGG ATCGGGCTGC TAACCGCTGT GGTGATGGTG
GCGTTGGGTC AGGGCGCGGG CGGCGCGCTG GCATTCGGGG CGTGCCTGTT CGCCGTCGGC
GTGGCGTTCG CCGGGACGCA GGCGGTCGCG GTGCAGCTCA CCGAGACCGG GCGCGCCGCC
AACGGGATCG GGGCGCTCGT CCTCGGCGTG GCGTATCTGC TGCGTACGGT CGGCGACGCG
GCGGGGAACA GCGGCGGCGC CGGGTGGGTG GCGTGGCTGT CGCCGTTCGG GTGGATCGAG
CGGGTGCATC CGTGGGCCGG GAACCGGTGG TGGGTCCTCG GTGTGACGCT GGCCGCCGGG
GTCGTGGCCG CTGCCGTCGG CTATCGGGTG CAGAACGCGC GGGATCTGGG CAGCGGGCTG
TTGCCGCAGC GTCCGGGACC GGCGAGTGCC GGACCCGGGT TGCGCGGCGT GTTCGGGTTG
GGGCGGTGTT TGCAGCAGCC GACGTTGCTG GGGTGGATGG CTGGGATCTT CGTGTTCGGG
ATCGTCATGG GATCCATCGC CAAGGGCATC GACCAGTTGC TGAACGACAA TCAGCAGGTT
GAGAAGATCA TCGGTCGCTA TGGCGGGGTG CAGGGACTGA CCGACTCCTA CTTGGCGACC
GCCGTCAGCT TCCTGGGGAT GGCCGCGGCG TTCTACGCGG TGCAGGCGGT GCTGCGGCTG
CGCGGGGAGG AGACCTCGGG GCGTGCCGAG CCGGTGCTGT CCGGGTCGGC CGGGCGGCTG
GCGTGGGCGG GCAGCCACCT GGTGTTCCCG GCGGTCGGCA GCGCGCTGGT GATGGCGGCG
GGCGGGCTCG GGGTGGGGGT CGGCGCCGGG GCGGTGCTGG GGGATTTCTG GGGGTGGGTC
GGACGGATGG TGCGAGCCGG GCTGATCACC ACGCCGGCGT TGTGGATCAT CGCGGCGGTC
GCGGTGGCGC TGTTCGGGCT GATGCCGAAG TGGACGGCGG GGGCGTATGG GGTGTTCGGC
GTGCTGGTGT TCATCGCTTA TCTGGGCCCG TTGGTGAACG CTGGGCAGTG GTTCTTGGAC
CTGACGCCGT TCACGCACAT TCCGAAGGTT CCCGGCGGGG TGTTCCACTG GACGCCGCTG
GTGTGGATGA CGGCGGTGGC CGCGGTTCTC TCGGCGGTCG GGCTGGTCGG GTTCCGGCGG
CGGGACGTGT CATCTGCATG A
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| Protein sequence | MSAETASEPK KSDKKASTKT SKFATEPGAQ ADSDSGLRTL IKLASHRDRI MLPVWIYALL
ATVGGTAYSL KKLYPAQSDR DKLGASIGTN PSLRALYGPL YDTHSLGALT AWRTLGFGGL
LIGIMVVLLI TRHTRAEEES GRLELLGSGA VGRNAPLSAA LSIAVGVCFG IGLLTAVVMV
ALGQGAGGAL AFGACLFAVG VAFAGTQAVA VQLTETGRAA NGIGALVLGV AYLLRTVGDA
AGNSGGAGWV AWLSPFGWIE RVHPWAGNRW WVLGVTLAAG VVAAAVGYRV QNARDLGSGL
LPQRPGPASA GPGLRGVFGL GRCLQQPTLL GWMAGIFVFG IVMGSIAKGI DQLLNDNQQV
EKIIGRYGGV QGLTDSYLAT AVSFLGMAAA FYAVQAVLRL RGEETSGRAE PVLSGSAGRL
AWAGSHLVFP AVGSALVMAA GGLGVGVGAG AVLGDFWGWV GRMVRAGLIT TPALWIIAAV
AVALFGLMPK WTAGAYGVFG VLVFIAYLGP LVNAGQWFLD LTPFTHIPKV PGGVFHWTPL
VWMTAVAAVL SAVGLVGFRR RDVSSA
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