Gene Caci_5622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5622 
Symbol 
ID8336982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6481909 
End bp6482703 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content74% 
IMG OID644958726 
Productprotein of unknown function DUF1275 
Protein accessionYP_003116322 
Protein GI256394758 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.37363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGCCT CCTGGCGCGC CTGCACCGCC CGCGCCCGGG ATCGCGCCAT CCTGATCTCC 
GTGGCGCGAT TGTGGAAGGT GCCCGGGACC GCGGGGCTGA TGGTGCTGCT CACGGCTGTC
GCGGGGTGGG TGGACTCGGT CGCCTACGTG CGCTCCGGCT CGGTGTTCGT CGCGAACCAG
ACCGGCAACG CGGTGTTCCT GGCGGTGCAG GTGGCAGAGC GCTGGGTTCC GGGGGTGCAC
CCCGCGGGCG TCGTCACCGA GCCCGACACC TACGGGCCCT TCTCCTCGCT GCTCGGCTTC
TGCGTCGGCG TCGCGATCGC GGTGCCGCCG CTGCGCCGCT CGCGCCGCGC CGACGACCCC
GAAGTCCCCT GGATCCTGCT GGTGATCGAG GCGCTGCTGC TCGCCTCAGT GATCGTGCTC
GCCTCCGCGC CGCGTGAACT GCGGCTCGGG GTGGAGGCCG CGGCGATGGG AGTGCAGAGC
GCTTACGCCG CCGGGGTCGC GATGCGCGGG GTCTCGACCA CCACGCTCAC CGGCACGCTC
GTGACGCTGA TCTCGGCGTT CGCCGAGGAG CCGGGACGCC GCGCGCGCAA AGCCATCGTG
CTGCTGACGA CGGTCTGGGC CGCTTACACG ATCGGCGCCT GGGGCGGCGC GGCAGCCGGG
CTGTCCTGGT CGATCGGGAC GGTGCACGGT TGCGCCGCCG CGGCCGTGGC GCTCGCGGCG
TTCGCCGTGT GGCGGGACCG GCGCACCCGG CAGGACCGGC ACGACCGGCG AGAAAGCCGC
CGCCGCCCGG CCTGA
 
Protein sequence
MAASWRACTA RARDRAILIS VARLWKVPGT AGLMVLLTAV AGWVDSVAYV RSGSVFVANQ 
TGNAVFLAVQ VAERWVPGVH PAGVVTEPDT YGPFSSLLGF CVGVAIAVPP LRRSRRADDP
EVPWILLVIE ALLLASVIVL ASAPRELRLG VEAAAMGVQS AYAAGVAMRG VSTTTLTGTL
VTLISAFAEE PGRRARKAIV LLTTVWAAYT IGAWGGAAAG LSWSIGTVHG CAAAAVALAA
FAVWRDRRTR QDRHDRRESR RRPA