Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5406 |
Symbol | |
ID | 8336760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6230828 |
End bp | 6232162 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958504 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003116106 |
Protein GI | 256394542 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.283217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGGC TTTTCGCGTA CCCCGGCTAC GCCCGATTCT GGAGCGCGGA CACGGTGTCC ACGTTCGGGA CTTATGTCGC GACCGTGGCG TTGCCGACGC TGGCGGTGAT CGTCCTCAAG GCCAGCGACA CCCAGGTCGG GCTGCTCAAC GGCGCGCGCT GGACGCCGTA TCTGCTGTTC GGGCTGCTGG CCGGCGTGGT GGCGGACCGC TATCGGCGCC GGCCGATCCT GGTCGCGACC GATCTCGTGC GCGGGGTGCT GCTGGCGGTG GTCGCCGTGC TCGCCGCGGT GCACATCGTG AACATCTACG AACTCGCCGG GTTCGTCTTC GTCTTCGGCA TCCTGTCGCT GCTCTACGAC GCGGCGCACC AGTCCTACCT GCCGCGCCTG GTCCCGCCGG CGAGTCTGAC GGTCGCCAAC GCGCGCCTGG AGCAGACCAC GGCGCTGGCG CAGACGACCG GGCCGTTCAT CGGCGGCGCG CTGGTGGCGG CGATCGGGGC GCCGCTGGCG ATGATGATCG ACGCGGCGTC GTATCTGGTT TCCGGGCTGA CGCTGGCGAC GATCCGCGTT CCGGAGCCCG TGCCGCATGC CGAGTCGCGG AATCTGAAGG CGGAGATGCG CGAAGGACTG CGCTTCGTCT ACCGCGACCC GGTGATGCGC GCCTACGCGC TGACGCTGCA CGCGCGGTTC CTGTTCGCGA GCGTCATCGG GACGGTCTTC ACGCTGTTCG TGCTGCGCGA TCTGGGCGCC GGGTCGCCGC GGGCGGCGTT CGGGCTGGGG CTGGTGCTGG CCGCCGGCGG GGTCGGGGCG GTGATCGGCA ACGGGATGGC GCAGCGGTTG GGGCGCGGGG GCGTCGGGCG CGTGATGGTC GCCGAGCGGT TGGCCGAGCC GGTCGCGTGG TCGGTGGCGG CGCTCGCGGT GAGCGGCGCC GCGGGGTGGG CGATGGTGGC CGGGGCGCAG TTCTTGGCGT GGCTGGCGCT CGGGGCGAGC GGGCCGAACG AGATGGCGTA TCGGCAGTCG GCGACGCCGG ACCGGTTGCA GGGACGCGTG AACGCCACGG TCCGGTCGCT GAATTGGGGC ATGATCACCT TCGGCGCGCC GGTCGGCGGG CTGCTGGCGC AGCATCTCGG GTATCGGCCG GCGCTGTGGG CCGGGGTCGC GGGAATGGCG GCTTCCGGAG TCGTCGCCGC GCTGTCGCCG ATGCGCCGTG CGCGCGTCAC GGAAACGCCG GAGGACCCGG AAAAACCTGA AATCCTTGCA GACCCTGTAA ACCCCGAAGA CCCGGAACCT CAGGAAGGAA CTGGCGAAAA CACCGCCAAG GGCGTCGGCG TTTAG
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Protein sequence | MTRLFAYPGY ARFWSADTVS TFGTYVATVA LPTLAVIVLK ASDTQVGLLN GARWTPYLLF GLLAGVVADR YRRRPILVAT DLVRGVLLAV VAVLAAVHIV NIYELAGFVF VFGILSLLYD AAHQSYLPRL VPPASLTVAN ARLEQTTALA QTTGPFIGGA LVAAIGAPLA MMIDAASYLV SGLTLATIRV PEPVPHAESR NLKAEMREGL RFVYRDPVMR AYALTLHARF LFASVIGTVF TLFVLRDLGA GSPRAAFGLG LVLAAGGVGA VIGNGMAQRL GRGGVGRVMV AERLAEPVAW SVAALAVSGA AGWAMVAGAQ FLAWLALGAS GPNEMAYRQS ATPDRLQGRV NATVRSLNWG MITFGAPVGG LLAQHLGYRP ALWAGVAGMA ASGVVAALSP MRRARVTETP EDPEKPEILA DPVNPEDPEP QEGTGENTAK GVGV
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