| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5368 |
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| Symbol | |
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| ID | 8336722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6188532 |
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| End bp | 6190301 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958466 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_003116068 |
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| Protein GI | 256394504 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.621632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.350782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGG TCGGAGTGGT ACTGGCCGCG GCCGCACTGC TCACCTACGG CCTGAGCGGT
GCCCCGGCCC AGGCCGGTAC CTCCAGCGGG AACGTCACCG CGGCGTTCGC GGACGCCGCC
CACACCTACG GCGTGCCGCA GCAAGTCCTG GAATCGGTCT GCTACCTGGA GGGCAGGCTC
GGCGCGCACG GCGGGCAGGC CAGCGTGGAC GGCGGCTACG GCTGCATGAA CCTGGTGAAG
AGCGACAAGG CCGACACGCT CGACCAGGCC GCCAAGCTCA CTGGACTGAG CGTCAGCGCC
CTGCAACACG ACACCGCGGC GAACATCCGC GGCGGTGCGG CGGTGCTCCG TGCCGAGGCG
CTGTCCTTGG CGCCGAAACT GCCGACCTCA CTGGCCGGCT GGTACGCGCC GATCGCCGCC
TACAGCCACG CTTCCTCGCG GTCGGTGGCC GGGATGTACG CCGACGCCGC GTACAAGCTG
ATCGCCGGCG GCTTCACCGG GATCGCGGAC GACGGCTCCC AGATAACCCT GGCGCCGCAG
GCCGTGACAC CGGACACGTC CACGCTCGGC TCGGTGCCGC TGGCTCCCGG TGCGCTGCCC
GGCGGATGCG TGAAGGACAG CAAGGTCGAC TACCCGTCGG CGATCGACTG CGTGGTCCCG
ACTTCCTACG ACTGCAACGT GGTCAGCGGG CCGTGCACGT ATGAGAGCTC GAACCGTCCG
ACGAGCTATG CCGTCTACGA CGTGACCATC CACGACATCG AGGGCACCGC GCAGGATGCC
CTGACCACCT TCCAGGACAT CAGCAAGGGT GTCAGCGTCC ACTACGTCAT CGACAGCGAC
GGCACGGTCT ACCAGGTGGT CAGAGAGAAG GACATCGCGT ACCACGCGGG GAACTTCTAC
TACAACGAGC ACGCGGTCGG GATCGAGCAC GCAGGCATCG ACGCCACCGG CTACCAGTGG
TACAACGCCA CCGAATACCT GGCCTCGGCC AAGCTGGTCG CCTACCTGGC GAACAAGTAC
AACATCCCGC TGGACCACGC CCACATCACC GCGCACGGCA CCACCCCGGC GCCGACCACC
GCCAGTTCGC CGAACCACGT CGACCCGGGC AAGTACTGGC TGTGGGACTA CTACTTCGGG
CTGATCCACT CCCTCGGAGT CCCGTACCCG ACCGGGAACA CCCCGGCCAC CGGACTGTTC
CGGGTGAACC CGAGCAGCGA CCAGAAGCCG TTGGGCGCGG ACGGGACCGA GACCGCGGCC
AACAACAGCT TCTTCAAGCT CTATACCGGG CCGAGTACTA AGGACGCTGT CATTCCGGGA
GCACCGGGCA CCGATCCCAA CGACGAGACC ACGAACATCG AGACCCAGAT GCCGTACTAC
TACCTCGCCT CCCAGCCGGA CCAGGGCGGC AGCGGGATGA CGATGTACCA GATCTGGTAC
GGCGAGAACG ACCGGCTGTC CAACGCCACG CCGAGCCAGT ACGCCGATGC GAAGAAGGCG
TGGCTGGCGG TTCCGGCGGG GTCGGCGGTG CCCGTCCACT CCTATGTGGT GAGCCTGAAG
CCGCCGACGG CGAACGGGAC GATCGGCATC TACGGGCGTC CGACAACGAG TTCGTCGTAC
GTCATCGGCA CCGCGCCGTC CGGCTCGCTG TGGGCCGCGC CGAAGTCGGT GTTCGAGGAC
GGCACGAAGA ACCTGTGGTT CGGGATCGAC TACAACCATC GCGAGGCGTG GGTGCCGAGT
TCGGAGGTGA CGGTCGTCGA CTGGTACTGA
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| Protein sequence | MRMVGVVLAA AALLTYGLSG APAQAGTSSG NVTAAFADAA HTYGVPQQVL ESVCYLEGRL
GAHGGQASVD GGYGCMNLVK SDKADTLDQA AKLTGLSVSA LQHDTAANIR GGAAVLRAEA
LSLAPKLPTS LAGWYAPIAA YSHASSRSVA GMYADAAYKL IAGGFTGIAD DGSQITLAPQ
AVTPDTSTLG SVPLAPGALP GGCVKDSKVD YPSAIDCVVP TSYDCNVVSG PCTYESSNRP
TSYAVYDVTI HDIEGTAQDA LTTFQDISKG VSVHYVIDSD GTVYQVVREK DIAYHAGNFY
YNEHAVGIEH AGIDATGYQW YNATEYLASA KLVAYLANKY NIPLDHAHIT AHGTTPAPTT
ASSPNHVDPG KYWLWDYYFG LIHSLGVPYP TGNTPATGLF RVNPSSDQKP LGADGTETAA
NNSFFKLYTG PSTKDAVIPG APGTDPNDET TNIETQMPYY YLASQPDQGG SGMTMYQIWY
GENDRLSNAT PSQYADAKKA WLAVPAGSAV PVHSYVVSLK PPTANGTIGI YGRPTTSSSY
VIGTAPSGSL WAAPKSVFED GTKNLWFGID YNHREAWVPS SEVTVVDWY
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