| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5280 |
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| Symbol | |
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| ID | 8336634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6081823 |
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| End bp | 6083721 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958378 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003115980 |
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| Protein GI | 256394416 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.18548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTCTA CCGTTTGGTT CGGGCTGCTG GGCCCGGTGG ACATCAGGCT GGACGGCGAG
GCGGTTCCGC TGCCGTCCGC CCGGACCAGG GCATTGCTGG CCGCACTGCT GTGCCAGGCC
AACCGGGTGG TCAGCGTGGA CGGTCTGGTG GACGCGGTCT GGGGCGCCGA TCCGCCCGAC
GGAGCGGTCA CGACGCTGCG CAGCCATGTC ATGCGCCTGC GGCGCTGTCT GGGCTCGGAG
GCCGGCCGGC TGGAGACCGT GGCGCCGGGC TACCGCATCC TGCTGGATCC GGCCACCGAG
CTGGACACGA AGATCTTCGT GGCGCGCTAC CAGGCCGGCC AGGCGGCCGC GGACGCCGGG
GACTGGCGCG CCGCGGCACG CTTCGCCGCC GAGGCCCTCG CGCTGTGGCG CGGCGAACCG
CTGGCCGACG TGCCCTCGGA ACTGCTGCAC CTGGAGGAGG CCGCCGCCTG GGCCGAGATG
CGGGTCGAGG CGATCGAGCT GCGCGCGCGG GCCGACATCT CGCTGGGGCG GGCGGCCGAC
GCGGCGGCGG CGCTGCGGCG CCTGGCGGCC GATCATCCGC ACCGGGAGCC CGCCTACGCG
CTGCTGATGT CGGCGCTGGC GGCGGCTGAC CGGCGGCCGG AGGCCTTGCA GGTGTACCGG
TTGCTGCGCA CGGTGCTGGT TCGGGACTTG GGGATGGAGC CGAGCCCTGA GCTACGTGCA
CTGCATCAGC GGATTCTGGC GATGGACGCC GCGCTGGCCG ATGCCGCGGA CGACCGTGCT
GACGGCGTCG CGGGGGAGGA GCCGGCGGAG GAGTCGGCGG GCGAGCCGAG CGCCGGATAC
GCAGCCTGGC CCACGCCGCA TACCCTGCCG TGGGACACCG CCGATTTCAC CGGTCGCGAG
GACGCGGTGC ACCGCATCGC TGATGCGTCC GCGGACAGGT GCGGCGGCGC GTTCGCCGTC
GTCATCGACG GAATGGCCGG CGTCGGCAAG AGCGCGCTGG CGATCCACGC GGCCCACCGG
CTGGCGGACC GGTTCCCGGA CGGGCAGCTC TACGCGGACA TGCTCGGCAC GTCGGCGGAT
CCGGCTCAGC CGGACGCTGT GCTGGCCGTG TTTCTGCGGC TGCTCGGTAT CGCGCCGGAC
GAGGTGCCAG GGACGTGTGT GGAGCGTGCC GGGCTGTATC GCAGCTTCCT GGCAGAGCGC
CGCGTGTTGG TCGTGCTCGA CGACGTGCGC GACGCGAAGC AGATGGCGCC GCTCATTCCG
GCATCGCCCG GATCCGCGGT GCTGGCAACC ACGCGGGATC GGCAGGTCGG CGTCGCGGGG
GCGCTGCACG TGTCGCTCAG CACCCTGACA CAGGACGAGT TGCGCACGCT GCTCACGCGG
ATAGTCGGCG CCGATCGCAT CGCTGCCGAA CCCGAGGCGG TCGAGGAGAT CCTGACCGCC
TGCGCCGGGC TGCCGTTGGC GCTCCGAGCC GTCGGCGGAC GCATCGCCGC ACGACCCACC
TGGACGATCG CCGATTTCGC GAGCCGCCTG ATTCCGGACG CAGGGCTTCT GGACGAGTTC
AGATTCGGTG ACCACGACGT GCGGGCGAGC TTCGAGGCCG GATTCGCCTC ACTCGGGAGC
GCGTCGGCGA CCGCGGTGTG CCTGCTGGGA TTGTGCAGCG GCGCAGAACT GGGACTTCCA
GTCGCGGCAT CGCTGCTGAA CCGGCCGGTC GGCCAGACCG AGGAGATTCT GGAGCGGCTG
GTCGATCTGA ACCTGGTCCA GTCCCCGCAG CACGGCCGGT ACCTGCTGAA CGGTCTTGTC
CGCGAGTTCG CCGCCGAGAA GGCACGCAGC GTGCTGACCG ACGACCAGCA TCAGGCTGCT
GCGACGCTGT GGCGGTTGCC GCACGCTCGG ACGGCTTGA
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| Protein sequence | MGSTVWFGLL GPVDIRLDGE AVPLPSARTR ALLAALLCQA NRVVSVDGLV DAVWGADPPD
GAVTTLRSHV MRLRRCLGSE AGRLETVAPG YRILLDPATE LDTKIFVARY QAGQAAADAG
DWRAAARFAA EALALWRGEP LADVPSELLH LEEAAAWAEM RVEAIELRAR ADISLGRAAD
AAAALRRLAA DHPHREPAYA LLMSALAAAD RRPEALQVYR LLRTVLVRDL GMEPSPELRA
LHQRILAMDA ALADAADDRA DGVAGEEPAE ESAGEPSAGY AAWPTPHTLP WDTADFTGRE
DAVHRIADAS ADRCGGAFAV VIDGMAGVGK SALAIHAAHR LADRFPDGQL YADMLGTSAD
PAQPDAVLAV FLRLLGIAPD EVPGTCVERA GLYRSFLAER RVLVVLDDVR DAKQMAPLIP
ASPGSAVLAT TRDRQVGVAG ALHVSLSTLT QDELRTLLTR IVGADRIAAE PEAVEEILTA
CAGLPLALRA VGGRIAARPT WTIADFASRL IPDAGLLDEF RFGDHDVRAS FEAGFASLGS
ASATAVCLLG LCSGAELGLP VAASLLNRPV GQTEEILERL VDLNLVQSPQ HGRYLLNGLV
REFAAEKARS VLTDDQHQAA ATLWRLPHAR TA
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