| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5264 |
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| Symbol | |
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| ID | 8336618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6062654 |
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| End bp | 6064066 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958362 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003115964 |
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| Protein GI | 256394400 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.641699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GGACCCCGAC CCCGCGGACC CGCGCGCGCC GCGACCAGCT GACGGCCATC
GCCGCCGGCC TGTTCGCCCG CGACGGCTAC CACAACGTGA CCGTCGGCGA CATCGCCGCC
GCCGCGGGAC TGTCCGGCCC GGCCATCTAC CGCCACTTCC CCGGCAAGCA GGCCCTCCTG
GCCGAGGTGG TGCGCTCCGG CTTTGACGAG ATGGCCGGCG TCCTGGCCGC CGACCTGGCC
GGGACGTCGG ACGCGGCCGA ACGACTGCGC AGGACGTACC GCGACCTGGC CGCGTTCGTG
ACCCGCCGGC CCGAATTCGG CGTGATGTGG CGCCGCGAGT ACCGCCACCT GGCGCCCGAG
GACGCCGCCG AGCTGGCCAA GCGCATGGGA GAGGCCTCGG ACGCGGTGGT CGCGGAGCTG
CGCGTACTGC GCCCGGAACT GGAACCCGCG GACGCGGAAC TGGTGGCATG GGCGGCGCTG
AGCGTGATGG GCAGCGTCTC GGACCACCGG GTGCGGCTGC CGCGCGCGGC CTTCGAGGAG
CTGCTCGCCG GGATCGCGAT GGATGTGGTG TCGGTGGAGT TCGGCGCGGG CACTGAGAGC
GTAGATAACA GGCCCCAAAA GATAGACGCG CAAGACCGGA AGGAACAGAT CCTGGCTGCC
GCCGCGCGAC TGTTCTGGGA CCGCGGCTAT CACGAGGTGA CGCTGGACGA GATCGGGGCG
GCGGCGGGGA TCGCCGGGCC CAGTGTCTAC AGCCACTTCG CGGGGAAGAC CGACCTGCTG
CGGACGATCA CCGAGCGGAT CGGGGAGTTG TTGCGGCGGG ATCTTGTTGC GAGCGATGCT
GCGGCGCAGG AAAGAGTGGC GCAGGAAAGA GCAGAGAAGG CCAGCGGCTC GGTGGCAGCT
GCGAGTGTGC CCGAGCTGGC GCTGGACTCG GCCGCCGAGC AGCTGCTTGA GCCTGCCTCG
GCTGCTGCCG CGAGTGCGCC TGACCCAGCG GCTTCGATCG CGAGCGTGTC CGCGCCGGCG
CCCGATTCCG CCGCCGCAGC TCTCGCCATC ACCGCCACCG CCACCCTCGC CGACCTGGCC
ACCCGCTACG TCACCACCGT CCTGTCCTCC CGCGACCTCG TCGCCGCCTA CTTCACCGAG
GGCCACAACC TCCCCGACCG CGATCGTGCC GAGACGCGCC GGTTTCAGCG TGCCTACGCC
GCGCACTGGT CCGCGCTGCT CGCGAGTGCG GATCCCGGCG CCTCGCCTGA GGAGATCCGG
ATTCGGGTGC TCGCGGCGTT CGCCGTCGTC AACGACACGG CGCGGACCCG TCGGCTGCTC
GAACGGCCCG GGTTGGCCGG GCGGTTGCGG GCGCTGATGC TGGCGGTGCT CTTGACACCG
GTGTCCGGGG CGCGCGATGT TAATCGCCGT TAG
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| Protein sequence | MTTRTPTPRT RARRDQLTAI AAGLFARDGY HNVTVGDIAA AAGLSGPAIY RHFPGKQALL
AEVVRSGFDE MAGVLAADLA GTSDAAERLR RTYRDLAAFV TRRPEFGVMW RREYRHLAPE
DAAELAKRMG EASDAVVAEL RVLRPELEPA DAELVAWAAL SVMGSVSDHR VRLPRAAFEE
LLAGIAMDVV SVEFGAGTES VDNRPQKIDA QDRKEQILAA AARLFWDRGY HEVTLDEIGA
AAGIAGPSVY SHFAGKTDLL RTITERIGEL LRRDLVASDA AAQERVAQER AEKASGSVAA
ASVPELALDS AAEQLLEPAS AAAASAPDPA ASIASVSAPA PDSAAAALAI TATATLADLA
TRYVTTVLSS RDLVAAYFTE GHNLPDRDRA ETRRFQRAYA AHWSALLASA DPGASPEEIR
IRVLAAFAVV NDTARTRRLL ERPGLAGRLR ALMLAVLLTP VSGARDVNRR
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