| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5229 |
|---|
| Symbol | |
|---|
| ID | 8336583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6019388 |
|---|
| End bp | 6020221 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958327 |
|---|
| Product | Enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_003115929 |
|---|
| Protein GI | 256394365 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.164951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCA CCGAACCGGC CCTGCCGGAG CACGAATGGC AACTCCGGCT GGAGACCGGC
GACGACGGCG TGGCCACCCT GCTCCTGGAC CGCCCCGAGA AGCTGAACGC CTGGAGCTGG
GAAGCCTCGC GGCAGCTGGC GCGACTGGCG GCCCGGGTGC GTTTCGACGA CAGCATCAGG
GTCCTGGTCC TCCGCGGCTC GGGGCGTGCC TTCTGCGCCG GCGTCGACCT CGGCCTGCCC
GAGGACCGCA TCACCGGCCG CTCGGAGGCG GAGCGCGCCC GCAACTTCGC CGAGGGCCTG
CGCTGGGTGC ACGAGCAGTT CCGCGCCTTC GCGACCCTGC CGCAGCCCAT CATCGCCGCC
GTCCACGGCT ACTGCCTCGG CTTCGGCTTC GAACTAGCGC TGATGTGCGA CATCCGCCTA
GCCGCCACCG ACGCGATCTT CGCCCTCCCC GAAGCCACCA TCGGCATGGC CGTCGACGCC
GGCGGCGACC TCCGCCTAGC CCGCGACGCA GGCACCGGCT GGGCAAAACT CCTAGCCCTC
ACCGGCCGCC GCATCGACGC ACCGACCGCA GCCCGCATCG GCGTGCTCCA GGACGTAGTC
GCCCCCGAGG ACCTGCTGCC CGCCGCCTAC GCGCTGGCGC GAGAGATAGC CGGGAACGCC
CCACTGGCGG TGCAGGCGAT CAAGCGCTCG GTGGACACCT TCGCCGACCG CGGCCTGACC
GAGGCCATGG CACAGACAGC ACTCCTCGCA GCAACGACAT TCGTGTCAGA GGACGCACCG
CTCGGCTACG CGGCCAAGGC AGCACGTCGC GCGGCGAAGT TCGAGGGCAA GTGA
|
|---|
| Protein sequence | MFRTEPALPE HEWQLRLETG DDGVATLLLD RPEKLNAWSW EASRQLARLA ARVRFDDSIR
VLVLRGSGRA FCAGVDLGLP EDRITGRSEA ERARNFAEGL RWVHEQFRAF ATLPQPIIAA
VHGYCLGFGF ELALMCDIRL AATDAIFALP EATIGMAVDA GGDLRLARDA GTGWAKLLAL
TGRRIDAPTA ARIGVLQDVV APEDLLPAAY ALAREIAGNA PLAVQAIKRS VDTFADRGLT
EAMAQTALLA ATTFVSEDAP LGYAAKAARR AAKFEGK
|
|---|
| |