Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5150 |
Symbol | |
ID | 8336504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5914582 |
End bp | 5916486 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958248 |
Product | hypothetical protein |
Protein accession | YP_003115850 |
Protein GI | 256394286 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0397106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0961186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCCG CCGAGGGAGG CGGTGGCGGC GACGGCTGGT GGCCGCTGAG CCCGAACGGC GATCCGGCCA AGGGCAACGC CGGGACGCTG TCCACGCATG TGACGGCGTA CACGAAGATC GCCTCGCAAG CGGCGTCGGT GTCGAAGGCG TTGACCGGCC TGTGTGTCGA CGAATTCTGG GACTCCGACT CCGGCACGGC GTTCAAGGTG CGCTGCGACA ACCTCGCCGC CGAACTCGCC AAGATCGTCT CGCGGTATCA GACCGCTGCC GACGCGCTGA AGGCCTACAT CCCGGACCTG GAGCACGCGC AGACGAACGC GGCCAGCGCC AAGAGTCTCG GCGACAGTGC GGAGTCCGAC TTCGCCGCCA TCGGCTACAC CTACAACCCG AGCGGGGAGT TCGGCGCCAC CTTCACCGGC GTCCGGGTGC CCTTCGCCCC GACCGTGCCC TCCGCCAAGC CGATGTCCCC GGTGGACCCG CACTGGGGCA AGTACCAGAC GGCGGCTCAG GAGTGGAACA CCGCGGTGCG CCGGGTCGCC GACGCCGCGC ACCTGCACGA CACCAGCGCG TCCGCCGCCG CCCGCAAGAT CAAGGCGGTC GCCGAGGGCG ACGGTGTGTC CAACCAGCAC TGGACCGCCC TGGACGGGCA GCAGCGGGCC TTCCTGTCGC AGCTGACCAA CCCCGCCACC GTCGAGTCCG CGGTCCTGAA CCTGCCGCTG GTCAACCCCA ACGGGGAGCA GAACGGCGGC GTCAATCCGG AGCTGCCGAT CGATCCGTCG GTGCTGGAAG CGGTCCTGGA CGACCTGCGG TCCAAGAACG TGGATCCCAA GCAGTACAAG ACGCTGCTCG ACCAGTATTG GGTCGCCACC GCCGCGCAGC ACGCCGGCAT CGACCTGAAC GAGTGGGACC CGGCGGCCGG CACCGGTCCG AACATGGCCA ACATCCAGGC TGTGTACACG TACTACGGGA AGCTGTTCCT GGACCATCCC GAGCTCCAGT GGGCCGGTAT GGCGAACATG ATCGGGCCCT CCTTCGCCGG CGGGTTCATG GACATCGACA TGTTCCGCAA GTTCGCGCAG GACTTCGCGA CGAAGGTGGA CGGCCTGCCG GCGGCGGTGC GCGAGTCCCT GCCGCCGGAG CTGCAGCAGC TGGCCGCAGC CGGCGGCCAG ATGTCGGCCA CCGAGCTGAA GTACTTCGAG ACCAAGTTCC TGGCGATGCA GAAGCACATC TTCTTCGACC AGGCCGCCGC GCACGAGGCG TATCTGGCCG GGCCGCCGAA CAACAAGACG GCCTACATCG ACGAGATGCA GAAGGCCGGG CTGTTCCCCG GCGACGTCCC GCCGGACAAG ACCGCGAACG CCTGGCACGT CATCGCCAAC CCGCACAGCA CGCCGCAGCA GGTCATGGAC GCGAACGGCA CGCTGCTCTA CCGCGAGCAG AACGTCGTGA TCAAGGACCA GTACAACCAG ATGTACAACC ACGACGGACC GGTGGGCAAG GCCTTCACGT ACATGATGAC CACGGTCGGC GCGGCGTCCA TCCCGGGCAC GCACACGCCC GGGGAGTACC GGCCGATCAC CTTCGGCGGC GACGTCAGCG TCCCGGTGGT CGTCGGCAAG GAGACGGTCG GGGTCCATGT GACGACACCG CTGCCGGACT TCAACATCAC CAACACGCAG GACCGCTGGG ACTACGTCAC GCACGACACG CTCCCGGCGT ACCAGAAGCT GCTGCAGCAG GATCCGAACC TGGCCCGGCA GATCGTCGCC ACGCCGGTGC AGGACCGGAT CGCGCAGCAG CGGCTGTCCG CGCGCTGGCC GACCATCGCC GACGACCTGC TGGCCAAGGA CTGGGACATC AAGCTGGACC ACCACTTCAC CCCCGGCCTT GACCTCCCCT GGTAG
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Protein sequence | MRPAEGGGGG DGWWPLSPNG DPAKGNAGTL STHVTAYTKI ASQAASVSKA LTGLCVDEFW DSDSGTAFKV RCDNLAAELA KIVSRYQTAA DALKAYIPDL EHAQTNAASA KSLGDSAESD FAAIGYTYNP SGEFGATFTG VRVPFAPTVP SAKPMSPVDP HWGKYQTAAQ EWNTAVRRVA DAAHLHDTSA SAAARKIKAV AEGDGVSNQH WTALDGQQRA FLSQLTNPAT VESAVLNLPL VNPNGEQNGG VNPELPIDPS VLEAVLDDLR SKNVDPKQYK TLLDQYWVAT AAQHAGIDLN EWDPAAGTGP NMANIQAVYT YYGKLFLDHP ELQWAGMANM IGPSFAGGFM DIDMFRKFAQ DFATKVDGLP AAVRESLPPE LQQLAAAGGQ MSATELKYFE TKFLAMQKHI FFDQAAAHEA YLAGPPNNKT AYIDEMQKAG LFPGDVPPDK TANAWHVIAN PHSTPQQVMD ANGTLLYREQ NVVIKDQYNQ MYNHDGPVGK AFTYMMTTVG AASIPGTHTP GEYRPITFGG DVSVPVVVGK ETVGVHVTTP LPDFNITNTQ DRWDYVTHDT LPAYQKLLQQ DPNLARQIVA TPVQDRIAQQ RLSARWPTIA DDLLAKDWDI KLDHHFTPGL DLPW
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